Gene Information

Name : VAB18032_22890 (VAB18032_22890)
Accession : YP_004406278.1
Strain : Verrucosispora maris AB-18-032
Genome accession: NC_015434
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4091741 - 4092457 bp
Length : 717 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
GTGTGGAAGGTGTACGGCAGCGGCGAGGCTCAGGTCATCGCGCTGCAGGGGGTGAGCGCCGAGTTCGAGCGCGGACGGTT
CACTGCGATCATGGGCCCCTCGGGCTCCGGCAAGTCGACGCTCATGCACTGCCTGGCCGGGTTGGACACGGTCACCCGAG
GCACCGTGCACGTCGGCGACACCACGGTCACCGGTCTCGGTGACGCCGGTCTGACGAAGCTGCGGCGCGACAAGATCGGC
TTCATCTTTCAGCAGTTCAACCTGCTGCCGACGCTGACCGCCAAGGAAAACATCCTGCTGCCGCTCTCCATCGCCGGCCG
CAAGCCCGACCAGGCCTGGTACGACATCGTCATCGACACGGTCGGGCTGCGCGACCGGCTCGACCACCGGCCGGCGCAGC
TCTCCGGCGGCCAGCAGCAGCGGGTGGCGTGCGCGCGGGCCCTGGTGGCCCGCCCCGAGGTCATCTTCGCCGACGAACCG
ACCGGCAACCTGGACTCGCGGGCCGGCGCCGAGGTGCTGAACTTCCTGCGCAACTCGGTACGCGAGCACGGTCAGACCAT
CGTGATGGTCACCCACGACCCGACCGCCGCCGCGTACGCCGACCGGGTGGTCTTCCTGGCCGACGGGCAGATCGTCTCCG
AGTTGATCGAGCCGACCGCCGACACGGTGCTGGACACGATGAAGAAGCTGGACACCCTGACCGAGGTGGCTCCCTGA

Protein sequence : 
MWKVYGSGEAQVIALQGVSAEFERGRFTAIMGPSGSGKSTLMHCLAGLDTVTRGTVHVGDTTVTGLGDAGLTKLRRDKIG
FIFQQFNLLPTLTAKENILLPLSIAGRKPDQAWYDIVIDTVGLRDRLDHRPAQLSGGQQQRVACARALVARPEVIFADEP
TGNLDSRAGAEVLNFLRNSVREHGQTIVMVTHDPTAAAYADRVVFLADGQIVSELIEPTADTVLDTMKKLDTLTEVAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-25 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-33 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-36 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-36 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-36 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAB18032_22890 YP_004406278.1 ABC transporter CP001581.1.gene798.p Protein 1e-36 47
VAB18032_22890 YP_004406278.1 ABC transporter CP001581.1.gene598.p Protein 6e-40 46
VAB18032_22890 YP_004406278.1 ABC transporter NC_012469.1.7686878. Protein 3e-35 46
VAB18032_22890 YP_004406278.1 ABC transporter NC_008702.1.4606598. Protein 3e-32 45