|
Name : VAB18032_20120 (VAB18032_20120) Accession : YP_004405726.1 Strain : Verrucosispora maris AB-18-032 Genome accession: NC_015434 Putative virulence/resistance : Virulence Product : winged helix family two component transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 3464198 - 3464977 bp Length : 780 bp Strand : - Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain DNA sequence : GTGACCGGTAGTGGCGACGGGTGTCCGGCGTTCGGGCACCCGCCGCCGACCGTCACGGCGAGCGACGACCGGGGTGCGCG GGACTACCCTGGGTACGTCATGGACGGCCGCGTGCTGGTGGTCGAGGACGACGCCTCCATCAGGGAGGTCACCGCCCTCG GGCTGCGCCGCGCCGGGTTCCGGGTGGACACCGCCGCCGACGGTCGACAGGGTCTGGCCGCCTGGCGCGCCGGGTCGGTC GATCTGATCGTGTTGGACGTGCTGCTGCCGGGCTTGGACGGTCTGCAGGTGTGCCGGGAGATCAGGCGCAGCAACGCGGT GCCGATCCTCATGCTCACCGCCCGCACCGACACCATCGACGTGGTGGTCGGGCTGGAGTGCGGCGCCGACGACTACCTGC GTAAACCCTTCGACCTGCCCGAACTGGTGGCCCGGGTACGGTCGCTGCTGCGCCGCGCCGTCGCAGCACCCGAGCCGGGC CCGCTGCGGATCGGTCGCCTGGAGATCGACCCTGGCGCTTTCGTGGCCCGCCGGGACGGTCACGAGCTGCCGCTGACCGC CACCGAGTTCCGGCTGCTGCTGGAGCTGGCCCGCCGCCCGGGGCAGGTCTTCACCCGCGAGCTGCTGCTGGAACGGGTCT GGGAGCAGGGCTACCTCGGCGACAGCCGGCTGGTCGACGTGGCGGTGCAGCGGCTGCGGGCCAAGGTCGAGGACGATCCG GCCAGTCCACGCCTGATCCGCACCGTACGTGGTGCCGGCTACAAGCTGACCGCGAGCTGA Protein sequence : MTGSGDGCPAFGHPPPTVTASDDRGARDYPGYVMDGRVLVVEDDASIREVTALGLRRAGFRVDTAADGRQGLAAWRAGSV DLIVLDVLLPGLDGLQVCREIRRSNAVPILMLTARTDTIDVVVGLECGADDYLRKPFDLPELVARVRSLLRRAVAAPEPG PLRIGRLEIDPGAFVARRDGHELPLTATEFRLLLELARRPGQVFTRELLLERVWEQGYLGDSRLVDVAVQRLRAKVEDDP ASPRLIRTVRGAGYKLTAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 3e-20 | 46 |
| copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 2e-19 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VAB18032_20120 | YP_004405726.1 | winged helix family two component transcriptional regulator | AE000516.2.gene3505. | Protein | 2e-39 | 54 |
| VAB18032_20120 | YP_004405726.1 | winged helix family two component transcriptional regulator | NC_012469.1.7685629. | Protein | 2e-36 | 49 |
| VAB18032_20120 | YP_004405726.1 | winged helix family two component transcriptional regulator | NC_002952.2859905.p0 | Protein | 1e-30 | 47 |
| VAB18032_20120 | YP_004405726.1 | winged helix family two component transcriptional regulator | NC_013450.8614421.p0 | Protein | 8e-31 | 47 |
| VAB18032_20120 | YP_004405726.1 | winged helix family two component transcriptional regulator | NC_007793.3914279.p0 | Protein | 8e-31 | 47 |
| VAB18032_20120 | YP_004405726.1 | winged helix family two component transcriptional regulator | NC_007622.3794472.p0 | Protein | 1e-30 | 47 |
| VAB18032_20120 | YP_004405726.1 | winged helix family two component transcriptional regulator | NC_002745.1124361.p0 | Protein | 8e-31 | 47 |
| VAB18032_20120 | YP_004405726.1 | winged helix family two component transcriptional regulator | NC_009782.5559369.p0 | Protein | 8e-31 | 47 |
| VAB18032_20120 | YP_004405726.1 | winged helix family two component transcriptional regulator | NC_002951.3237708.p0 | Protein | 8e-31 | 47 |
| VAB18032_20120 | YP_004405726.1 | winged helix family two component transcriptional regulator | NC_003923.1003749.p0 | Protein | 8e-31 | 47 |
| VAB18032_20120 | YP_004405726.1 | winged helix family two component transcriptional regulator | NC_002758.1121668.p0 | Protein | 8e-31 | 47 |
| VAB18032_20120 | YP_004405726.1 | winged helix family two component transcriptional regulator | NC_009641.5332272.p0 | Protein | 8e-31 | 47 |
| VAB18032_20120 | YP_004405726.1 | winged helix family two component transcriptional regulator | BAC0125 | Protein | 5e-22 | 46 |
| VAB18032_20120 | YP_004405726.1 | winged helix family two component transcriptional regulator | BAC0308 | Protein | 8e-20 | 46 |
| VAB18032_20120 | YP_004405726.1 | winged helix family two component transcriptional regulator | BAC0083 | Protein | 3e-22 | 45 |
| VAB18032_20120 | YP_004405726.1 | winged helix family two component transcriptional regulator | BAC0638 | Protein | 1e-16 | 45 |
| VAB18032_20120 | YP_004405726.1 | winged helix family two component transcriptional regulator | HE999704.1.gene2815. | Protein | 7e-30 | 44 |
| VAB18032_20120 | YP_004405726.1 | winged helix family two component transcriptional regulator | BAC0111 | Protein | 1e-20 | 42 |
| VAB18032_20120 | YP_004405726.1 | winged helix family two component transcriptional regulator | CP001918.1.gene3444. | Protein | 5e-21 | 42 |
| VAB18032_20120 | YP_004405726.1 | winged helix family two component transcriptional regulator | BAC0039 | Protein | 3e-21 | 42 |
| VAB18032_20120 | YP_004405726.1 | winged helix family two component transcriptional regulator | CP000034.1.gene2186. | Protein | 3e-21 | 42 |
| VAB18032_20120 | YP_004405726.1 | winged helix family two component transcriptional regulator | NC_002695.1.916589.p | Protein | 3e-21 | 42 |
| VAB18032_20120 | YP_004405726.1 | winged helix family two component transcriptional regulator | AE015929.1.gene1106. | Protein | 2e-21 | 41 |
| VAB18032_20120 | YP_004405726.1 | winged helix family two component transcriptional regulator | BAC0347 | Protein | 2e-19 | 41 |
| VAB18032_20120 | YP_004405726.1 | winged helix family two component transcriptional regulator | BAC0596 | Protein | 6e-20 | 41 |
| VAB18032_20120 | YP_004405726.1 | winged helix family two component transcriptional regulator | CP001138.1.gene2239. | Protein | 6e-20 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VAB18032_20120 | YP_004405726.1 | winged helix family two component transcriptional regulator | VFG0596 | Protein | 1e-20 | 46 |
| VAB18032_20120 | YP_004405726.1 | winged helix family two component transcriptional regulator | VFG1389 | Protein | 5e-19 | 45 |
| VAB18032_20120 | YP_004405726.1 | winged helix family two component transcriptional regulator | VFG1390 | Protein | 9e-23 | 43 |
