Gene Information

Name : VAB18032_06000 (VAB18032_06000)
Accession : YP_004402926.1
Strain : Verrucosispora maris AB-18-032
Genome accession: NC_015434
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 305435 - 306256 bp
Length : 822 bp
Strand : +
Note : COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components

DNA sequence : 
ATGACCCGGCCCGAGGTGCCCGCCGTCGTGTCCCCCGCCGAGGTGCCTGCCGTCGAGGTGCGTGGTCTTCAGGTCAAGCT
CGACGGGGTGCCCATCCTCGCCGGCATCGACCTGACCGTGCGCTCGGGCGAGTGGGTCACCGTGATCGGTCCGAACGGCG
CCGGCAAGTCGACCCTGCTGCGCGCCGTCGGCGGCCTGCTGCCCGCACCGGACGCGGTCCGCCTCTTCGGTACGCCCCTG
CGCGACCTGCGCCGCCGGGAACGGGCCCGGGTGGTGGCCACGGTGGCCCAGTCCCCGGTCGTGCCGCCCGGGATGGCGGT
GCTCGACTACGTGCTGCTCGGTCGGAACCCGTACATCCCGCCGTTGGGGCGGGAGTCCGCCACCGACCTGGCCGTCGTGC
ACGAACTGCTGGACCGGCTGGACCTCGGCGGGTTCCACGGCCGCGAACTGGCCACCCTCTCCGGCGGGGAACGCCAGCGG
GTCTTCCTCGCTCGGGCGTTGGCCCAGGGCGCCACCCTGCTGCTGCTCGACGAGCCGACAAGCGCGTTGGACATCGGCCA
CCAGCAGGAGGTGCTGGAACTGGTCGACCAGTTGCGCCGTACCGAGGGCCTGACCGTAGTGGCCACCATGCACGACCTCT
CCATCGCCGGCGAGTACGCCGACCGCATGGTGCTGCTCGCGAACGGCCGCATCGCCGCCACCGGCACCCCCGACCAGGTC
CTCACCGAAGACCTCCTCTCCCACCACTACCGCGCCCACGTCACCGTCATCCCCGGCCCCCACGGCCCTTTGGTCCTCCC
CACCCGCCCCTCCCACCCCTAA

Protein sequence : 
MTRPEVPAVVSPAEVPAVEVRGLQVKLDGVPILAGIDLTVRSGEWVTVIGPNGAGKSTLLRAVGGLLPAPDAVRLFGTPL
RDLRRRERARVVATVAQSPVVPPGMAVLDYVLLGRNPYIPPLGRESATDLAVVHELLDRLDLGGFHGRELATLSGGERQR
VFLARALAQGATLLLLDEPTSALDIGHQQEVLELVDQLRRTEGLTVVATMHDLSIAGEYADRMVLLANGRIAATGTPDQV
LTEDLLSHHYRAHVTVIPGPHGPLVLPTRPSHP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-31 42
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAB18032_06000 YP_004402926.1 ABC transporter BAC0164 Protein 3e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAB18032_06000 YP_004402926.1 ABC transporter VFG1042 Protein 3e-31 41