Gene Information

Name : VAB18032_19040 (VAB18032_19040)
Accession : YP_004405510.1
Strain : Verrucosispora maris AB-18-032
Genome accession: NC_015434
Putative virulence/resistance : Resistance
Product : low molecular weight phosphotyrosine protein phosphatase
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0394
EC number : -
Position : 3232204 - 3232617 bp
Length : 414 bp
Strand : +
Note : COG0394 Protein-tyrosine-phosphatase

DNA sequence : 
GTGTCCGACGACAAGCCCAGCGTCCTGTTCGTCTGTGTGCACAACGCCGGCCGCTCCCAGATGGCCGCCGGCTGGCTGCG
TCACCTCGCCGGCGACACCGTCGAGGTCCGCTCCGCCGGGTCCGCCCCCGCCGAGACCATCAACCCCGCCGCCGTCGAGG
CCATGCGCGAGGTCGGCATCGACATCACCGACCAGACACCCCGGCTCCTGGCGTACGACACCGTCGAAGCCTCCGACGTC
GTCATCACGATGGGCTGCGGCGACGTCTGCCCCGCCTTCCCCGGCAAGCGCTACGAGGACTGGCAGCTCGACGACCCGGC
CGGCAAGGGCGTCGAAGCCGTACGCCCGATCCGCGACGAGATCAGGACCCGCATCGAGACACTGCTCGCCGACCTCCTGT
CGACGACTCCCTAG

Protein sequence : 
MSDDKPSVLFVCVHNAGRSQMAAGWLRHLAGDTVEVRSAGSAPAETINPAAVEAMREVGIDITDQTPRLLAYDTVEASDV
VITMGCGDVCPAFPGKRYEDWQLDDPAGKGVEAVRPIRDEIRTRIETLLADLLSTTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC YP_252023.1 arsenate reductase Not tested SCCmec Protein 2e-18 43
arsC YP_252016.1 arsenate reductase Not tested SCCmec Protein 1e-17 42
arsC YP_005754064.1 arsenate reductase Not tested Type-XI SCCmec Protein 3e-16 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAB18032_19040 YP_004405510.1 low molecular weight phosphotyrosine protein phosphatase BAC0032 Protein 1e-17 42
VAB18032_19040 YP_004405510.1 low molecular weight phosphotyrosine protein phosphatase BAC0580 Protein 6e-18 42
VAB18032_19040 YP_004405510.1 low molecular weight phosphotyrosine protein phosphatase BAC0581 Protein 8e-14 42