Gene Information

Name : VAB18032_19035 (VAB18032_19035)
Accession : YP_004405509.1
Strain : Verrucosispora maris AB-18-032
Genome accession: NC_015434
Putative virulence/resistance : Resistance
Product : arsenical-resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0798
EC number : -
Position : 3231002 - 3232141 bp
Length : 1140 bp
Strand : +
Note : COG0798 Arsenite efflux pump ACR3 and related permeases

DNA sequence :
GTGACCGCCACCCCGGCCGGCGCAACACCGCCGGCAGTCGTCGCGCGGCTGTCGCGCCTCGACCGCTTCCTCCCGCTGTG
GATCGGTCTGGCCATGGCCGCCGGCCTGCTGCTGGGCCGACTCGTCCCCGGCCTGAACACCGCCCTGGACGCGGTCACGA
TCGGCGGGATCTCCCTGCCGATCGCCCTCGGTCTGCTCATCATGATGTATCCGGTGCTGGCCAGGGTCCGCTACGACCGG
CTCGACTCGGTCACCGGCGACCGCCGGCTGCTGCTCTCCTCACTGCTGCTCAACTGGGTCCTCGGCCCGGCTCTCATGTT
CGCCCTCGCCTGGATCTTCCTCGCCGAGCACGCCGAGTACCGCACCGGCCTGATCATCGTCGGTCTCGCCCGCTGCATCG
CGATGGTCATCATCTGGAACGATCTGGCCTGCGGCGACCGCGAAGCCGCCGCTGTCCTCGTCGCCCTCAACTCGGTGTTC
CAGGTCGTCGCGTTCGGCCTGCTCGGTTGGTTCTACCTGTCCGTGCTGCCGAGTTGGCTCAACCTCAGCGGCGCGCAGTT
ACAGGTCTCCGGCGGGGACATCGCGGTCAACGTGCTGATCTTCCTCGGCATCCCGCTGCTCGCCGGCTACCTCACCCGCC
GTCTCGGCGAACGCGCGAAGGGCCGCACCTGGTACGAAAGCCGCTTCCTGCCGAGGATCGGACCGGTCGCCCTCTACGGG
CTGCTCTTCACCATCGTCATCCTGTTCGCGCTGCAGGGCGACGCCATCACCTCGCAGCCCTGGGACGTCGTGTTGATCGC
GGTGCCGCTGCTGGTCTACTTCGCGGTCATGTGGGCCGGCGCGTACGCTCTCGGCCGGGCCATCGGCCTGAGCTACGCGC
GCACCACCACCCTCGCGTTCACCGCCGCCGGGAACAACTTCGAGCTGGCCATCGCGGTGGCCGTCGGCACGTTCGGCGTC
ACCAGCGGTCAGGCCCTCGCCGGTGTCGTCGGCCCGCTCATCGAGGTTCCGGTGCTGGTCGCCCTGGTCCACGTCAGCCT
CGCCCTGCGCCGACGCCTGTTCCCGGCCGAGATCACCACCACCGCGCGGCGAGGCCCTGCACCGGCTGTTGTCCGATCCG
GCAGGACTCGCCGGCGATGA

Protein sequence :
MTATPAGATPPAVVARLSRLDRFLPLWIGLAMAAGLLLGRLVPGLNTALDAVTIGGISLPIALGLLIMMYPVLARVRYDR
LDSVTGDRRLLLSSLLLNWVLGPALMFALAWIFLAEHAEYRTGLIIVGLARCIAMVIIWNDLACGDREAAAVLVALNSVF
QVVAFGLLGWFYLSVLPSWLNLSGAQLQVSGGDIAVNVLIFLGIPLLAGYLTRRLGERAKGRTWYESRFLPRIGPVALYG
LLFTIVILFALQGDAITSQPWDVVLIAVPLLVYFAVMWAGAYALGRAIGLSYARTTTLAFTAAGNNFELAIAVAVGTFGV
TSGQALAGVVGPLIEVPVLVALVHVSLALRRRLFPAEITTTARRGPAPAVVRSGRTRRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 4e-69 50
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 3e-69 50
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 2e-56 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAB18032_19035 YP_004405509.1 arsenical-resistance protein BAC0573 Protein 2e-76 53
VAB18032_19035 YP_004405509.1 arsenical-resistance protein BAC0004 Protein 4e-59 44