Gene Information

Name : VAB18032_18095 (VAB18032_18095)
Accession : YP_004405321.1
Strain : Verrucosispora maris AB-18-032
Genome accession: NC_015434
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2969143 - 2969898 bp
Length : 756 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGCGGGCGGACGAGACAACGGCGAGCAGTGCGGCCGTCACTACACAGGACCTGACGCGGGTGTACGGCAGCGGTGCCGG
GGCGGTCCGCGCGTTGGACGGTGTGTCGGCGTCCTTCGCCCGGGGCCGTTTCACGGCGGTGATGGGCCCGTCCGGCTCGG
GCAAGTCGACGTTCCTGCACTGCCTGGCCGGCCTCGACCGGCCGACGTCCGGTGCGGTGGTGGTCGCCGGTCAGCAGCTC
GCCCGGTTGAACCGGACCGCGCTGGCCAAGCTCCGCCGGGAGCGGATGGGCTTCGTGTTCCAGGCGTTCAACCTGCTGCC
GGTGCTCACGGCGGAGGAGAACATCACCATGATCGCTCATCTCGCCCGCCGCCGGGTCGACCGCGCCTGGATGGCCCAGT
TGGTGGCCCGGCTCGGCCTCGCCGACCGGCTGGACCATCGGCCGGCCCAACTCTCCGGCGGTCAGCAGCAGCGGGTGGCG
ATCGCCCGAGCGTTGCTCACCCGGCCGGACGTGGTCTTCGCCGACGAGCCGACGGGCAACCTCGACTCCCGTTCCGGCAC
GGAGGTGCTGCGGTTCCTGCGCGAGGCGGTCGAGACGGAGAACGCGAGCATCGTGATGGTCACACATGATCCGACCGCCG
CGGCCTACGCCGACGAGGTGCTGTTCCTCGCCGACGGCCGGATCGTCGACACACTCGCCGAGCCGACCGTCGACGAGGTT
CTGGCGCGGCTGCGGCGGATCTCGGAGCCGAGCTGA

Protein sequence : 
MRADETTASSAAVTTQDLTRVYGSGAGAVRALDGVSASFARGRFTAVMGPSGSGKSTFLHCLAGLDRPTSGAVVVAGQQL
ARLNRTALAKLRRERMGFVFQAFNLLPVLTAEENITMIAHLARRRVDRAWMAQLVARLGLADRLDHRPAQLSGGQQQRVA
IARALLTRPDVVFADEPTGNLDSRSGTEVLRFLREAVETENASIVMVTHDPTAAAYADEVLFLADGRIVDTLAEPTVDEV
LARLRRISEPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-36 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-38 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-38 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-38 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAB18032_18095 YP_004405321.1 ABC transporter CP001581.1.gene598.p Protein 6e-48 45
VAB18032_18095 YP_004405321.1 ABC transporter NC_008702.1.4606598. Protein 9e-34 45
VAB18032_18095 YP_004405321.1 ABC transporter CP001581.1.gene798.p Protein 1e-41 44