Gene Information

Name : VAB18032_17540 (VAB18032_17540)
Accession : YP_004405210.1
Strain : Verrucosispora maris AB-18-032
Genome accession: NC_015434
Putative virulence/resistance : Virulence
Product : LuxR family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 2853122 - 2853802 bp
Length : 681 bp
Strand : -
Note : COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

DNA sequence :
GTGATCACGGCAGAGTCGCAGATCAAGGTGCTGCTCGCCGACGACGAGAAGCTGGTGCGTTCCGGGTTCAAGCTGCTGCT
CGACCTGGAAGACGACATCACCGTGGTCGGTGAAGCGACGGACGGTGCCGAAGCGGTGGAGGCTGCTCGCAGCGCCCGCC
CGGACGTCGTCGTGATGGACATCCGGATGCCGAAGCTGGACGGCATTCAGGCCACGACCCAGATCAGCCGGATGCGCGGG
CTGGAGCGGGTACGCATCCTCATCCTCACCACCTACGACACCGATGCCAATGTCTTCGACGCGCTGCAGGCCGGTGCCAG
TGGCTTCCTGCTCAAGGACGCCGGACCGGCCGAACTCCTGCACGCCATCCGGGTGGTCGCCGCAGGGGATGCGCTGCTCG
CCCCGCGGATCACCCGGCGTCTCATCGGCCAGTTCACGGCACGGCGGACGGCCGCCGGCGCCGCTCAGGAGCGGCTCGCG
GTGCTCACCGACCGGGAGCGGGAGGTGCTGGCGCTGGTGGGGCGGGGTCTGAACAACGACGAGATCGGTGGCGAATTGTT
CCTCAGCCCGGCGACCGCGCGTACCCATGTCAGCCGTGCGATGGCGAAGCTGGGTGCCCGTGACCGGGCGCAACTGGTCG
TCATCGCCTATCAGACCGGGTTGGTCAGCCCCGACGTGTGA

Protein sequence :
MITAESQIKVLLADDEKLVRSGFKLLLDLEDDITVVGEATDGAEAVEAARSARPDVVVMDIRMPKLDGIQATTQISRMRG
LERVRILILTTYDTDANVFDALQAGASGFLLKDAGPAELLHAIRVVAAGDALLAPRITRRLIGQFTARRTAAGAAQERLA
VLTDREREVLALVGRGLNNDEIGGELFLSPATARTHVSRAMAKLGARDRAQLVVIAYQTGLVSPDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
regB YP_001220830.1 putative two-component system response regulator Not tested chp/tomA region Protein 8e-41 46
CD241_0088 YP_005124357.1 two-component system response regulator Not tested Not named Protein 6e-32 41
DIP0091 NP_938488.1 two-component system response regulator Not tested Not named Protein 5e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAB18032_17540 YP_004405210.1 LuxR family two component transcriptional regulator VFG1824 Protein 8e-31 42