|
Name : VAB18032_15585 (VAB18032_15585) Accession : YP_004404829.1 Strain : Verrucosispora maris AB-18-032 Genome accession: NC_015434 Putative virulence/resistance : Virulence Product : ATPase aaa-2 domain-containing protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2392308 - 2394785 bp Length : 2478 bp Strand : - Note : COG0542 ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGTCGCTCGACGCGTTCCGCATCCCTGGCGGCTCCTTGGATGACCTGGTGAGTCGGTTCTTCGGAGGGGATCCGTTCGC GGGACGTCCGGTGGAGCGGGTCGACCTGTCCCGGCTGCTCTCCACCGAATCGCGGCAACTCCTGCAACGGGCAGCCGAGC AGGCTACAGAGTGGGGCAGCCCGTACCTCAACGTCGAGCACCTGCTGTGGGCCGCTGCCCAGTCCGACCCCACCCGCCGG ATCCTCGACGCGAGCGGCGCCGACTCCGACGACCTGGCTCGCCAGATAGAGTCGGCCGTCCCCAGGGGCAGGCCACGCGA GGACACGCCTCCGCTCGCGCCGGCGGCGAAGCGCGCCCTGCTCGACGCGCACCGCGAGTCGCGACGGTCCGGCGCGACAT ACATCGGCCCCGAACACCTCCTACTCGGCATCGCCGCGAACCCGGAGACGACCGCGGGCCGGGCGTTGCGGGCCCTCGGT GAGGCCGTCACCGGGCCCACGCCGCCGGCTGGCGGCGCCGGTGGGCGCGGGGCCAGCAGCACCCCCACCCTTGACCAGTA CGGGCGGGACCTCACCGAGGACGCCCGGGCCGGTCGGCTCGATCCGGTCGTCGGGCGTGACGACGAGATTGACGACACGA TCGAGGTGCTCTCCCGGCGTACGAAGAACAATCCGGTGCTCACCGGCGAGCCGGGCGTCGGCAAGACGGCGATCGTCGAG GGCATCGCACAGCGCATCATCAACGACGACGTGCCCGAAACCCTGGCCAACCGGCGTGTGGTCGCACTCGATTTGTCCGG GATGGTGGCGGGCACCAAGTACCGCGGTGAGTTCGAAGAGCGACTGAAGAACGTGATCCAGGAGGTGACGGCCGCCGAGG ACGAGCTGATCCTCTTCATCGACGAACTGCACACAGTTGTCGGCGCGGGCGGCGGTGGCGAGGGGGCGATGGATGCCGGC AACATGCTCAAGCCCGCCCTGGCCCGCGGCGAACTGCACGTGGTCGGCGCGACGACACTGAACGAGTACCGTCGCTACAT CGAGAAGGACCCGGCGCTGGAGCGCCGGTTCCAGCCGATCCTGGTGTCGGAGCCGAGCGTGGAGGACAGCGTCGCAATCC TCAAGGGCGTACGCGACCGGTACGAGGCGCACCATCAGGTGCGCTACACGGACGAAGCGCTAGACGCCGCGGCTGAACTG TCCCATCGCTACATCACCGACCGGTTCCTGCCGGACAAGGCCATCGACCTGCTCGACCAGGCGGGGGCACGGGTCCGGCT GCGTTCCCGCACCCCGGCTCCGGACAAAAAGGAGATCGAAAAGCGGCTGTCCCAGCTGCGCCGGGAGAAGGACAGCGCGG TGGCGAACGAGGACTACCAGCGCGCGGGTGCGCTGAAAGCCGAGATCGGTGCGGCCGAGCGGGACCTGGCGGCGGCGCAG GAGGGCACGCCTCCGGTGCCCGAGGTGCACATGAGCGACATCGCCGAAGTGGTCAGCCGCCGTACCGGTGTTCCCGTCAC CCAGCTCACGGAGGTAGAGAAGCAGAGGTTGAGGCGCATCGAGGAGCAACTGCACGAGCGCGTGGTCGGCCAGCACGAGG CCGTACGGGCTGTGGCGGCCGCCGTACGCCGATCGCGCTCCGGGCTGAGTGACCCCCAGCGACCCGACGGGTCGTTCCTC TTCCTTGGACCCACCGGCGTCGGCAAGACCGAGCTGGCCCGAGCCCTCGCCGCGGCGCTCTTCGGCGACGAGTCCAGCAT GATCCGCTTCGACATGAGCGAGTTCCAGGAGCAGCACACGGTCAGCCGGCTGGTCGGAGCGCCCCCGGGCTACGTCGGGT ACGAGGAGGCTGGCCAACTCACCGAGGCGGTTCGGCGCCGGCCGTACTCGGTGCTGCTCTTCGACGAGGTAGAGAAGGCG CACGCGGATGTGTTCAACGCGCTGCTGCAGGTGCTCGACGACGGTCGCCTCACCGATGCGCAGGGTCGCACGGTCGATTT CAGCAACACCATCCTGATCATGACGAGCAACATCGGCGCGGACCGCATTCTGGCCGCGCAGACGGCAGGGCGTCCAGTCA GCGACCAGCGCGAGGAACTGATGGGGCTGCTGGGGCAGCGGTTCCGGCCGGAATTCCTCAACCGGATCGACGAGATCATA ATTTTTACCGGCCTGGACCGGGACCAGCTCCTCGAGATCACCGGCCTACTGCTGGACCGCACCCGCCGCCGGTTGCACGC ACAGGACATCAACCTTGAGGTCAGCCCGGACGCCACCCAGTGGCTGGCCAACCGGGGCTACCAGCCCGAGTACGGGGCGC GGCCACTCCGGCGCAGCATCCAGCGTGAGCTGGAAGACCGGCTGTCGACCCTGCTGCTCGAGGACGGGGCGAATCCCGGC GACACCATCGAGGTCAATGTCGTCGGCGGCGAACTCGACCTCTCGGTCCGGCCTGCCGCCGCGTCGGCCGGCACATGA Protein sequence : MSLDAFRIPGGSLDDLVSRFFGGDPFAGRPVERVDLSRLLSTESRQLLQRAAEQATEWGSPYLNVEHLLWAAAQSDPTRR ILDASGADSDDLARQIESAVPRGRPREDTPPLAPAAKRALLDAHRESRRSGATYIGPEHLLLGIAANPETTAGRALRALG EAVTGPTPPAGGAGGRGASSTPTLDQYGRDLTEDARAGRLDPVVGRDDEIDDTIEVLSRRTKNNPVLTGEPGVGKTAIVE GIAQRIINDDVPETLANRRVVALDLSGMVAGTKYRGEFEERLKNVIQEVTAAEDELILFIDELHTVVGAGGGGEGAMDAG NMLKPALARGELHVVGATTLNEYRRYIEKDPALERRFQPILVSEPSVEDSVAILKGVRDRYEAHHQVRYTDEALDAAAEL SHRYITDRFLPDKAIDLLDQAGARVRLRSRTPAPDKKEIEKRLSQLRREKDSAVANEDYQRAGALKAEIGAAERDLAAAQ EGTPPVPEVHMSDIAEVVSRRTGVPVTQLTEVEKQRLRRIEEQLHERVVGQHEAVRAVAAAVRRSRSGLSDPQRPDGSFL FLGPTGVGKTELARALAAALFGDESSMIRFDMSEFQEQHTVSRLVGAPPGYVGYEEAGQLTEAVRRRPYSVLLFDEVEKA HADVFNALLQVLDDGRLTDAQGRTVDFSNTILIMTSNIGADRILAAQTAGRPVSDQREELMGLLGQRFRPEFLNRIDEII IFTGLDRDQLLEITGLLLDRTRRRLHAQDINLEVSPDATQWLANRGYQPEYGARPLRRSIQRELEDRLSTLLLEDGANPG DTIEVNVVGGELDLSVRPAAASAGT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-162 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VAB18032_15585 | YP_004404829.1 | ATPase aaa-2 domain-containing protein | VFG0079 | Protein | 4e-172 | 54 |
| VAB18032_15585 | YP_004404829.1 | ATPase aaa-2 domain-containing protein | VFG0080 | Protein | 2e-145 | 50 |
