Gene Information

Name : VAB18032_04595 (VAB18032_04595)
Accession : YP_004402645.1
Strain : Verrucosispora maris AB-18-032
Genome accession: NC_015434
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 15315 - 16103 bp
Length : 789 bp
Strand : +
Note : COG1484 DNA replication protein

DNA sequence :
ATGGCCGCCAAGACCAGCCGCAACGTCGCCTCGGAGATCGCGTTCCTCACCCGCGCTCTCAAGGCGCCGTCCCTCGCTGC
CTCCGTCGAGAGGTTGGCGGAGCGGGCCCGGGCGGAGTCGTGGACGCATGAGGAGTTCCTCGCCGCCTGTCTGCAACGCG
AGGTCGCCGCCCGGGAGGCTCACGGCGGTGAGGGACGCATTCGGGCAGCGAGGTTCCCGGCCCGCAAGAGCCTGGAGGAG
TTCGACTTCGAGCACCAACGCTCTCTGAAGCGGGAGACCATCGCCCACCTGGGAACCCTCGACTTCGTGGCGTCGAAGGA
GAACGTCGTCTTCTTGGGCCCGCCCGGCACCGGCAAGACCCACCTGTCCATCGGCCTCGGGATCCGAGCCTGCCAGGCCG
GGCACCGGGTCGCGTTCGCCACCGCCGCCCAGTGGGTGTCCCGCCTCGCTGATGCCCACCACGCCGGCCGGCTGCAAGAC
GAGCTGGTCAAGCTTGGCCGGATCCCGCTGCTGATCGTTGACGAGGTCGGCTACATCCCCTTCGAAGCCGAAGCGGCGAA
CCTGTTCTTCCAGCTGGTCTCCAACCGCTACGAACGAGCCTCGCTGATCGTCACCAGCAACAAACCCTTCGGCAGGTGGG
GCGAAGTGTTCGGCGACGACGTCGTCGCCGCGGCCATGATCGACCGCCTCGTCCACCACGCCGAGGTCATTTCGATGAAG
GGCGACAGCTACCGGCTCAAAGACCGCGACCTCGGCCGCGTCCCCGCAGCCACCAAGACCAACGACTGA

Protein sequence :
MAAKTSRNVASEIAFLTRALKAPSLAASVERLAERARAESWTHEEFLAACLQREVAAREAHGGEGRIRAARFPARKSLEE
FDFEHQRSLKRETIAHLGTLDFVASKENVVFLGPPGTGKTHLSIGLGIRACQAGHRVAFATAAQWVSRLADAHHAGRLQD
ELVKLGRIPLLIVDEVGYIPFEAEAANLFFQLVSNRYERASLIVTSNKPFGRWGEVFGDDVVAAAMIDRLVHHAEVISMK
GDSYRLKDRDLGRVPAATKTND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 1e-46 41
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 3e-46 41
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 1e-46 41
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 1e-46 41
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 1e-46 41
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 1e-46 41
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 1e-46 41
api84 CAF28558.1 putative transposase Not tested YAPI Protein 1e-46 41
unnamed CAA21402.1 - Not tested HPI Protein 1e-46 41
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 1e-46 41
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 9e-47 41
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 1e-46 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAB18032_04595 YP_004402645.1 transposase VFG1515 Protein 6e-47 41
VAB18032_04595 YP_004402645.1 transposase VFG1627 Protein 6e-47 41
VAB18032_04595 YP_004402645.1 transposase VFG1606 Protein 6e-47 41
VAB18032_04595 YP_004402645.1 transposase VFG1663 Protein 2e-46 41