Gene Information

Name : VAB18032_14540 (VAB18032_14540)
Accession : YP_004404620.1
Strain : Verrucosispora maris AB-18-032
Genome accession: NC_015434
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 2169018 - 2169938 bp
Length : 921 bp
Strand : +
Note : COG0214 Pyridoxine biosynthesis enzyme

DNA sequence :
GTGTCCGAGACGACTTCCCCGAACACCAGCGGCACCACCCCGGTCGTCGGCACTGCCCGCGTCAAGCGGGGGATGGCCGA
GATGCTCAAGGGCGGCGTGATCATGGACGTGGTCACCGCCGAGCAGGCCAAGATCGCTGAGGACGCCGGCGCGGTCGCGG
TGATGGCGCTGGAGCGGGTGCCCGCCGACATCCGCGCCCAGGGCGGGGTGTCGCGGATGAGCGACCCGGACATGATCGAC
GGGATCATCAACGCCGTCTCCATCCCGGTGATGGCCAAGGCCCGCATCGGCCACTTCGTCGAGGCGCAGATCCTCCAGGC
GCTCGGCGTCGACTACGTCGACGAGTCCGAGGTGCTCACCCCGGCCGACTACGCCAACCACATCGACAAGTGGGCCTTCA
CCGTCCCCTTCGTCTGCGGGGCGACCAACCTGGGCGAGGCGCTGCGCCGGATCACCGAGGGCGCCGCCATGATCCGCTCG
AAGGGTGAGGCCGGCACCGGGGACGTCTCCAACGCCACCACCCACATGCGCAAGATCCGTCAGGAGATCCGCCGACTCTC
CTCGCTGCCGGAAGACGAGCTGTACGTCGCGGCCAAGGAGCTGCAGGCCCCGTACGAGCTGGTCAAGGAGGTCGCCGAGA
CCGGCAAGCTGCCGGTGGTGCTGTTCACCGCCGGTGGCATCGCCACCCCGGCCGACGCGGCGATGATGATGCAGCTCGGC
GCGGAGGGCGTCTTCGTCGGCTCCGGCATCTTCAAGTCCGGCAACCCGGCCCAGCGGGCCGCCGCGATCGTCAAGGCGAC
CACTTTCCACGACGACCCGGACGTGCTGGCGAAGGTCTCCCGCGGCCTCGGCGAGGCGATGGTCGGCATCAACGTCGACG
ACATCCCTGTCCCCCACCGCCTGGCCGACCGCGGCTGGTGA

Protein sequence :
MSETTSPNTSGTTPVVGTARVKRGMAEMLKGGVIMDVVTAEQAKIAEDAGAVAVMALERVPADIRAQGGVSRMSDPDMID
GIINAVSIPVMAKARIGHFVEAQILQALGVDYVDESEVLTPADYANHIDKWAFTVPFVCGATNLGEALRRITEGAAMIRS
KGEAGTGDVSNATTHMRKIRQEIRRLSSLPEDELYVAAKELQAPYELVKEVAETGKLPVVLFTAGGIATPADAAMMMQLG
AEGVFVGSGIFKSGNPAQRAAAIVKATTFHDDPDVLAKVSRGLGEAMVGINVDDIPVPHRLADRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 8e-116 83
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 7e-116 83
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 9e-116 83