Gene Information

Name : VAB18032_13650 (VAB18032_13650)
Accession : YP_004404442.1
Strain : Verrucosispora maris AB-18-032
Genome accession: NC_015434
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1972022 - 1972855 bp
Length : 834 bp
Strand : +
Note : COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components

DNA sequence : 
ATGTCGAGCGGACTGGCGTCGAACGACGCTGACCAGCGCCTACGCGGCGTCGACCTCTGCCTGGGATACCACGGTACGGC
AGTGGTTCACGGTGCCTCGATAGGGCTCCGTGCCGGTAAGGTGACCGCCCTCGTCGGCCCGAACGGTAGCGGCAAGTCCA
CCCTGCTGCGCGCGCTGGCCCGGCTGCACCCGATCGACACCGGCACGGTGCTCTGCGCCGACGGCATCGCCGCGGCCAGC
CTGCCGGCCAAGGAGTTCGCCCGCCGGGTCACCCTGCTCGCCCAGAGTCGACCGGTGCCCAACGGCGTCACCGTCCGCGA
CGTGGTCGGCTACGGCCGCCACCCCTACCGGGGCCGCTGGCGCACCGACGACCCCGAGGGCCCGACCGCGATCGCCCGCG
CGATGGCGGTCACCGGGGTGGCCGCGATGGCCGACCGGCCCGTCGACGAACTCTCCGGCGGCGAACTCCAGCGAGTCTGG
CTGGCCACCTGCCTGGCCCAGGACACCGCGGTGCTGCTGCTCGACGAACCCACCACCTTCCTCGACCTGCGCTACCAGGT
CGAGATCCTCGACCTGATGCGCGACCTGGCCGACGAGCACGGCGTCGCGGTCGGCGTGGTGCTGCACGACCTCAACCAGG
CCGCCGCGGTGGCCGACGAGGTCGTCCTGCTGCACAACGGCCGGATCCGTGCCACCGGCACCCCGGCGCAGGTCTTCACC
GAGACCGACCTGACCGAGACGTACGGCATCCGCATCGAGGTCGCCACCGATCCCCTCACCGGTCTGGTGACCACCCGCCC
CGTGGGACGTCACCTGACCCGAATCCCGGTCTGA

Protein sequence : 
MSSGLASNDADQRLRGVDLCLGYHGTAVVHGASIGLRAGKVTALVGPNGSGKSTLLRALARLHPIDTGTVLCADGIAAAS
LPAKEFARRVTLLAQSRPVPNGVTVRDVVGYGRHPYRGRWRTDDPEGPTAIARAMAVTGVAAMADRPVDELSGGELQRVW
LATCLAQDTAVLLLDEPTTFLDLRYQVEILDLMRDLADEHGVAVGVVLHDLNQAAAVADEVVLLHNGRIRATGTPAQVFT
ETDLTETYGIRIEVATDPLTGLVTTRPVGRHLTRIPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 7e-42 42
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-44 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAB18032_13650 YP_004404442.1 ABC transporter BAC0164 Protein 5e-42 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAB18032_13650 YP_004404442.1 ABC transporter VFG0925 Protein 3e-46 42
VAB18032_13650 YP_004404442.1 ABC transporter VFG1042 Protein 4e-42 42