Gene Information

Name : SSUST3_0740 (SSUST3_0740)
Accession : YP_004401382.1
Strain : Streptococcus suis ST3
Genome accession: NC_015433
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1086
EC number : -
Position : 746264 - 748090 bp
Length : 1827 bp
Strand : +
Note : -

DNA sequence :
ATGGATTTAGAAACTGTTACCGATAAACTTTTAGAGCGCAACATTAAACGATTGATACTCATGTGCATGGATACGTGTCT
TATTATAGTTTCCATGATTTTGAGCAGGCTGTTTTTGGATGTTATTATTGACATTCCAGATGAACGCTTTATTTTTGCAG
TTTTATTTGTTTTAATATTCTACCTGATTATCTCAGTTAGACTAAAGGTTTTTTCGCTAATTACGAGGTATACTGGATAT
CAAAGTTATGTGAAAATAGGACTGAGTTTGATATCCGTTTATTCATTATTTTTAATCATTTCAATGATTCTATGGCAGAC
CTTTAGTTATCGTTTCATCTTAGTATCCTTATTTTTGTCGTATGTAATGCTCATTACTCCGAGGATTGTTTGGAAAGTCT
TACATGAGACGAGAAAAAATGCCATTCGAAAGAAGGATAACCCACTAAGAATCTTAGTAGTAGGTGCTGGAGATGGTGGG
AATATTTTTATCAATACCGTCGAAGATAGAAAATTGAATTTTGAAATTGTCGGTATAGTTGATCGTGATCCAAATAAACT
TGGAACATTTATCCGTACCGCTAAAGTTTTAGGAAACCGTAATGATATTCCACGATTGGTAGAGAAATTAGCTGTTGACC
AAGTGGTGATTGCCATCCCTTCTTTAAATAGTAAGGAGCGAGAGAAGATTGTTGAAATCTGTAACACTACAGGAGTGACC
GTCAATAATATGCCGAGCATTGAAGACATTATGGCGGGTAACATGTCTGTCAGTGCCTTTCAGGAAATTGACGTAGCAGA
CCTTCTTGGTCGACTAGAGGTTGTTTTGGATCAGGATGAATTGAATCAGTTTTTCAAAGGGAAAACTATCCTTGTCACAG
GAGCAGGTGGCTCAATCGGTTCAGAGTTATGTCGTCAAATTGCTAAGTTTACGCCTAAATGCTTGTTGTTGCTTGGTCAT
GGAGAAAATTCAATCTATCTCATTCATCGAGAGTTACTGGAAAAGTACCAAGGTAAGATTGAGTTGGTCCCTCTCATTGC
AGATATTCAAGATAGAGAATTGATTTTTAGCATAATGGCTGAATATCAACCCGATGTTGTTTATCATGCTGCAGCACATA
AGCATGTTCCATTGATGGAATATAATCCACATGAAGCAGTGAAGAATAATATTTTTGGAACGAAGAATGTGGCTGAGGCG
GCTAAAACTGCAAAGGTTGCCAAATTTGTTATGGTTTCAACAGATAAAGCTGTTAATCCGCCAAATGTCATGGGAGCGAC
TAAACGTGTTGCAGAAATGATTGTAACAGGTTTAAACGAGCCAGGTCAGACTCAATTTGCTGCAGTCCGTTTTGGGAATG
TTCTAGGTAGTCGTGGAAGTGTTGTTCCGCTATTCAAAGAGCAAATTAGAAAAGGTGGACCTGTTACGGTTACCGACTTT
AGGATGACTCGTTATTTCATGACGATTCCTGAGGCAAGTCGTTTGGTTATCCAAGCTGGACATTTGGCAAAAGGTGGAGA
AATCTTTGTCTTGGATATGGGCGAGCCAGTACAAATCCTGGAATTGGCAAGAAAAGTTATTCTGCTGAGTGGTCATACTG
AGGAAGAAATTGGAATTGTTGAATCAGGTATTCGTCCTGGGGAAAAACTCTACGAGGAATTACTATCAACAGAAGAACGT
ATCAGCGAACAGATTTATGAAAAAATATTTGTAGGTCGCGTTACAAATAAACAATCGGACATTGTCAATTCATTTATCAA
TGGATTACTCAAAAAAGATAGAAATGAATTAAAAGATAAGTTGATTGAATTTGCAAAACAAGAATAA

Protein sequence :
MDLETVTDKLLERNIKRLILMCMDTCLIIVSMILSRLFLDVIIDIPDERFIFAVLFVLIFYLIISVRLKVFSLITRYTGY
QSYVKIGLSLISVYSLFLIISMILWQTFSYRFILVSLFLSYVMLITPRIVWKVLHETRKNAIRKKDNPLRILVVGAGDGG
NIFINTVEDRKLNFEIVGIVDRDPNKLGTFIRTAKVLGNRNDIPRLVEKLAVDQVVIAIPSLNSKEREKIVEICNTTGVT
VNNMPSIEDIMAGNMSVSAFQEIDVADLLGRLEVVLDQDELNQFFKGKTILVTGAGGSIGSELCRQIAKFTPKCLLLLGH
GENSIYLIHRELLEKYQGKIELVPLIADIQDRELIFSIMAEYQPDVVYHAAAHKHVPLMEYNPHEAVKNNIFGTKNVAEA
AKTAKVAKFVMVSTDKAVNPPNVMGATKRVAEMIVTGLNEPGQTQFAAVRFGNVLGSRGSVVPLFKEQIRKGGPVTVTDF
RMTRYFMTIPEASRLVIQAGHLAKGGEIFVLDMGEPVQILELARKVILLSGHTEEEIGIVESGIRPGEKLYEELLSTEER
ISEQIYEKIFVGRVTNKQSDIVNSFINGLLKKDRNELKDKLIEFAKQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 4e-106 54
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 9e-106 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSUST3_0740 YP_004401382.1 hypothetical protein VFG1300 Protein 4e-106 52