Gene Information

Name : SSUST3_0542 (SSUST3_0542)
Accession : YP_004401191.1
Strain : Streptococcus suis ST3
Genome accession: NC_015433
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 535093 - 535788 bp
Length : 696 bp
Strand : +
Note : -

DNA sequence : 
ATGAAGAACCAGCTTATTAGATTAACGAATATCAATAAATCCTACAAAAATGGTGATCAAGAGCTCCGAGTTCTAAAGGA
TATTGATTTAGAGGTGGAAGAGGGAGAATTTCTTGCCATTATGGGACCTTCTGGTTCAGGTAAATCAACCCTGATGAACA
TTATTGGGCTTTTAGATCGTTCCAGTTCAGGAAACTATTGGTTAGAAGGTGAAGAAGTCAGTCAACTTTCTGAGAAAAAA
TTAGCTCAGGTTCGGAATGACCAAATCGGTTTCGTCTTCCAACAATTTTTCCTCTTATCGAAACTCAACGCCCTTCAGAA
TGTAGAATTACCCTTGATTTATGCTGGAGTTCCATCAAGCAAACGTAAGGAACTAGCGAAACAATATCTTGAAAAAGTCG
AGTTGGCAGAGCGAATGACGCATTTACCATCGGAATTGTCTGGTGGTCAAAAACAACGGGTGGCTATTGCGCGTGCACTA
GTCAATACTCCGGCTATTATTTTAGCAGATGAGCCTACAGGGGCCTTGGATACTAAAACAGGTGAGCAGATTATGCAACT
TCTGACAGAGTTGAATAATGAAGGAAAGACAATTATCATGGTTACCCATGAACCTGAGATTGCTGCTTACGCAAAACGAA
AAATCGTCCTACGTGATGGAGTGATTACCGAAGATAGTCGAAGGGAGGGAGTTTAG

Protein sequence : 
MKNQLIRLTNINKSYKNGDQELRVLKDIDLEVEEGEFLAIMGPSGSGKSTLMNIIGLLDRSSSGNYWLEGEEVSQLSEKK
LAQVRNDQIGFVFQQFFLLSKLNALQNVELPLIYAGVPSSKRKELAKQYLEKVELAERMTHLPSELSGGQKQRVAIARAL
VNTPAIILADEPTGALDTKTGEQIMQLLTELNNEGKTIIMVTHEPEIAAYAKRKIVLRDGVITEDSRREGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-37 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-39 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-39 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-39 43
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-35 41
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSUST3_0542 YP_004401191.1 ABC transporter NC_012469.1.7686878. Protein 4e-87 81
SSUST3_0542 YP_004401191.1 ABC transporter NC_008702.1.4606598. Protein 2e-50 49
SSUST3_0542 YP_004401191.1 ABC transporter CP001581.1.gene798.p Protein 2e-40 44
SSUST3_0542 YP_004401191.1 ABC transporter CP001581.1.gene598.p Protein 4e-35 42