Gene Information

Name : Lbuc_0935 (Lbuc_0935)
Accession : YP_004398257.1
Strain : Lactobacillus buchneri NRRL B-30929
Genome accession: NC_015428
Putative virulence/resistance : Unknown
Product : glutamate racemase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0796
EC number : 5.1.1.3
Position : 995072 - 995866 bp
Length : 795 bp
Strand : +
Note : PFAM: Asp/Glu/hydantoin racemase; TIGRFAM: Glutamate racemase; HAMAP: Glutamate racemase; KEGG: lbr:LVIS_1214 glutamate racemase

DNA sequence :
TTGGATAATCGGCCGATTGGCGTTATGGACTCGGGGGTCGGCGGGCTTACCGTCTTAAAGGAAATCACCAAAATCCTCCC
GAATGAATCGTACATCTTTATTGGCGATCAGGCCAATTTACCGTACGGGCAAAAGAGTTCTGAAACCGTCAGAAAACTCA
CAAAAAGAATTGCAGACTATCTGGTTGAACAAAATATCAAAATGTTTGTAATTGCCTGTAACACAGCCACTGCTGCGGCA
TATGAATATTTAAAGAAAATTTTACCGATTCCGGTTATCGGCGTAATCGAACCGGGTGCCCAAATGGCCGTTGAAGCCTC
CAAATCCGGGGAGATTGGTGTGATTGCCACCAACGGCACCGTCCGCTCCGGAGATTATCAGCGATTGATCAAACAAGCCA
ACCGATCAGCAGTTGTGTCATCGTTAGGCTGTCCGGAATTTGTCACGATGGTCGAAGAGGGGCTTGCCGGAACCGTTGAA
GCTCAGGTTGCCGTGAACAACCGACTGGCTTGGTTTATGGATAAACCGATTGATACTTTGGTCATGGGCTGCACCCATTT
TCCAATTTTAAAAAATGAAATTCAAAATGTGATGGGCAATGCCGTCACGTTGATTGACCCGGGAGTCGCAACTGCTCAGC
AAGTCAAGGCAAAGTTAGCAGCTCATGATGGTTTTGCCCCCGCACAAAAACAGCGTGTTCGAAGATTTTACACCACCGGG
AACCCGGCGGATTTCGCCAAAGTTGCCGACAAGTTACTGGGAACACCGATTAGTGCCGTTAAGTTAGATATTTAA

Protein sequence :
MDNRPIGVMDSGVGGLTVLKEITKILPNESYIFIGDQANLPYGQKSSETVRKLTKRIADYLVEQNIKMFVIACNTATAAA
YEYLKKILPIPVIGVIEPGAQMAVEASKSGEIGVIATNGTVRSGDYQRLIKQANRSAVVSSLGCPEFVTMVEEGLAGTVE
AQVAVNNRLAWFMDKPIDTLVMGCTHFPILKNEIQNVMGNAVTLIDPGVATAQQVKAKLAAHDGFAPAQKQRVRRFYTTG
NPADFAKVADKLLGTPISAVKLDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1468 YP_001800862.1 glutamate racemase Not tested Not named Protein 3e-44 42