|
Name : Lbuc_0335 (Lbuc_0335) Accession : YP_004397674.1 Strain : Lactobacillus buchneri NRRL B-30929 Genome accession: NC_015428 Putative virulence/resistance : Unknown Product : ABC-2 type transporter Function : - COG functional category : V : Defense mechanisms COG ID : COG0842 EC number : - Position : 359018 - 360187 bp Length : 1170 bp Strand : - Note : PFAM: ABC-2 type transporter; KEGG: lps:LPST_C2280 ABC superfamily ATP binding cassette transporter, permease protein DNA sequence : ATGAGAATTCTAACAATCACTAAACGTATCTTTGTGGAAATGTTCCGCGATAAACGAACGCTTGCGTTAATGTTTATTGC GCCGCTGTTCATCCTGTCATTGATGTATTTCTTATTTCAGTCAAATACCAACACGGTCGCAGACATCGGCACCTATAATG TGTCTAGTTCATTGGTCAAAACAATCGACAACAAGCACATCAAAATTCATCGGATGGATTCGAATGTTTCAGCAAAAAAG ACCATTCGTAACAAAGACTACGCCGGTTTCATCAAAAAAACTGATGGCCACTTAGTCGTCACGTATCAAAATGCCGATCA GAGTAAGACCGCGATCATCAAGAAATCAGTTCAGATGGCTCTGATAAAAGTTCAAATTAAGCAGCTGGTTTCTACCACGA AACAGTCCAAAGCCGGCTTAATGAAGATGCAAGCTCAGCTCCAGCAAATTAAAAAGCAGCTGCCAGCGACCCTCAGCAGT CGGATTCCGGCAGCGTCCGCTCCAAAAAACGTCCAAAAGCCAACCAACCTGAAATTAACCCAGCACTATCTTTACGGCAA GAGTAATTCCACCTTCTTCACAACGATGCTGCCTGTGTTCTTGGGCTTCATGGTCTTCTTCTTTGTCTTCCTAATTTCTG GAATTTCACTGTTAAATGAGCGAAACTCCAGAACTTTGGACCGACTGCTGGCAACACCGGTTAAACGAAGTGAAATCATT TACGGCTACCTAACCGGTTATGGCGCTGTGGCGATCATTCAAACAGCGGTGATCGTGTTATTCTGTATCTATGTCTTAGG GATCTCCATTCTTGGCAGCATCTGGGTCGTCTTATTGATCTGTTTTGCTTTAGCAATGGTTGCGCTGTCGATGGGGCTGT TTGTTTCGACCTTTGCCGCTTCAGAATTTCAAATGGTCCAGTTCATTCCCATTGTCGTTATTCCACAAATTTTCTTCTCA GGTTTGATCCCAGTTGCCAACATGGCAGGCTGGCTGCAGGTTATCGCCCATATCATGCCGCTGTATTACGGGGCCAGTGC GTTAACCGACGTCATTCAAAAGCAGGCCAACTTTTCGGCAATTGTCCCACAATTTACAGCTATCCTAGCATTCTTGGTCG CCTTCATTGCTTTAAATATGATTGGAATGCGCAAGTATCGGAAAGTGTAG Protein sequence : MRILTITKRIFVEMFRDKRTLALMFIAPLFILSLMYFLFQSNTNTVADIGTYNVSSSLVKTIDNKHIKIHRMDSNVSAKK TIRNKDYAGFIKKTDGHLVVTYQNADQSKTAIIKKSVQMALIKVQIKQLVSTTKQSKAGLMKMQAQLQQIKKQLPATLSS RIPAASAPKNVQKPTNLKLTQHYLYGKSNSTFFTTMLPVFLGFMVFFFVFLISGISLLNERNSRTLDRLLATPVKRSEII YGYLTGYGAVAIIQTAVIVLFCIYVLGISILGSIWVVLLICFALAMVALSMGLFVSTFAASEFQMVQFIPIVVIPQIFFS GLIPVANMAGWLQVIAHIMPLYYGASALTDVIQKQANFSAIVPQFTAILAFLVAFIALNMIGMRKYRKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0082 | YP_251997.1 | hypothetical protein | Not tested | SCCmec | Protein | 9e-55 | 46 |
| SE0095 | NP_763650.1 | hypothetical protein | Not tested | SCCpbp4 | Protein | 1e-57 | 46 |
| SH2614 | YP_254529.1 | hypothetical protein | Not tested | ¥ðSh2 | Protein | 2e-53 | 43 |
