|
Name : Lbuc_2283 (Lbuc_2283) Accession : YP_004399585.1 Strain : Lactobacillus buchneri NRRL B-30929 Genome accession: NC_015428 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2826 EC number : - Position : 2416798 - 2417787 bp Length : 990 bp Strand : - Note : PFAM: Integrase, catalytic core; KEGG: ssp:SSP1423 transposase DNA sequence : ATGGATCACTACAAGCATATTACCATAGATGAACGGGAAACTATCTTTTTAATGAGGAATCATGGAAACTCACTTCGTGA GATTGCCAGCCATATCAAGAAAAGTTACTCAACCATTTCTCGAGAATTAAGCCGTAATTCTACTGGTAAATCCTATTCAC CTTCGAAGGCTCAGGAGAAGTACAAACAGCGCAAAGGCAACTGTGGCAGAGTCTCTCTCTTGAGTAATCCTCAGGTGTTT GAAGTGGTGAGAGAACACTTCTGCGAAGACCTTTGGTCTCCGGAGGAAATATCGAATCGCTTGGCAGTCGAAAAGTATCC GGTGCAGATCAGTACCACGACTATTTACCGTGGGATTTTCAATGGCTTATTTGATAATTTGTTTAAATCTGGCAGCTCTA GTGCCGTGCGCCATCTAAGGCATCACGGCAAGTCTCGCCACAATAAAGCTTATCAAGAAAAGCGAGGCAAGATTCCAATC CCAAACAAGATTCATGATCGTCCGCGAGAAGCTGACAACCGTGTAGAAATTGGTCACTGGGAAGGTGATACCGTGTTAGG CAAAAGCGGAAAGGCTTGTGTCGTTACATTGGTTGATCGAAAATCTCGTTACCTGCTTATTGGTAAAGCTGCTAAAAGAA CTTCAGAAGCAGTCACGGATACTTTGAGCGACTTAATGAAGCTATGGCCTGGTAGATCGTTAACGATTACCCCGGATAGG GGTAAAGAGTTTGCCAAAGTTCAATGTTTAACTGATAAGTTTGGTACGCCCTTCTACTTTCCCGATCCTCACTCTCCTTG GCAACGAGGAACTAACGAAAATACTAACGGCTTGCTTCGCGAATATTTGCCAAAAGGAACTGACCTTGATTCAATTACTG ACCGCCGGATACAAGCATATGCAGAACAAATGAATAATCGTCCCCGTAAATGTCTCGGATGGAAAACGCCTTATGAAATA TTCTTTAATGTCGTGTTGCACTTAATTTGA Protein sequence : MDHYKHITIDERETIFLMRNHGNSLREIASHIKKSYSTISRELSRNSTGKSYSPSKAQEKYKQRKGNCGRVSLLSNPQVF EVVREHFCEDLWSPEEISNRLAVEKYPVQISTTTIYRGIFNGLFDNLFKSGSSSAVRHLRHHGKSRHNKAYQEKRGKIPI PNKIHDRPREADNRVEIGHWEGDTVLGKSGKACVVTLVDRKSRYLLIGKAAKRTSEAVTDTLSDLMKLWPGRSLTITPDR GKEFAKVQCLTDKFGTPFYFPDPHSPWQRGTNENTNGLLREYLPKGTDLDSITDRRIQAYAEQMNNRPRKCLGWKTPYEI FFNVVLHLI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Pmu_02710 | YP_005176177.1 | ISApl1 transposase | Not tested | ICEPmu1 | Protein | 5e-71 | 50 |
| SAR0085 | YP_039551.1 | transposase | Not tested | Type-II SCCmec | Protein | 7e-51 | 42 |
| unnamed | BAC67550.1 | putative transposase | Not tested | Type-IVc SCCmec | Protein | 5e-51 | 42 |
