Gene Information

Name : Lbuc_1997 (Lbuc_1997)
Accession : YP_004399306.1
Strain : Lactobacillus buchneri NRRL B-30929
Genome accession: NC_015428
Putative virulence/resistance : Resistance
Product : Fur family ferric uptake regulator
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0735
EC number : -
Position : 2088186 - 2088653 bp
Length : 468 bp
Strand : +
Note : PFAM: Ferric-uptake regulator; KEGG: lrf:LAR_1232 ferric uptake regulator

DNA sequence :
ATGACAAACACAACTTTAAAACGTTCCCTGGGTCAACTTAAAAAACAGGGCGTCCGGATTACTCCTCAGCGAGAAGTGAT
CTTGGATTATTTGATTACCCACCATAATCACCCGGATGTCGAAACCATTCGCGACGGCATCGAAGACAAGTTGCCCAACC
TCAGCGTGGCAACAATCTATAACACCCTCAAGATGCTGGTCGACAATGGCTTGGTCATTGAACTGCCAAATAACGATGGC
GGCATCCGTTATGACTATTTTGGCGTTTCCCATTACCATGCAATCTGTGAAAATTGCGGCAAAATCATCGACATTTTTGA
TGATGACTATCCCGAATTAGTCAAACACGTTCAACAAACCACCAGAGAAAAAACCGACTTTCTGGTAACCGGTACCCAAT
TAGAGGTCACCGGGATTTGCCCGGATTGCCAGCGCAAACTCCACCTGGCCAAGCTTGCCAATAAATGA

Protein sequence :
MTNTTLKRSLGQLKKQGVRITPQREVILDYLITHHNHPDVETIRDGIEDKLPNLSVATIYNTLKMLVDNGLVIELPNNDG
GIRYDYFGVSHYHAICENCGKIIDIFDDDYPELVKHVQQTTREKTDFLVTGTQLEVTGICPDCQRKLHLAKLANK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
perR YP_281525.1 ferric uptake regulation protein Not tested Not named Protein 1e-20 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lbuc_1997 YP_004399306.1 Fur family ferric uptake regulator BAC0310 Protein 3e-29 45