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Name : Lbuc_1929 (Lbuc_1929) Accession : YP_004399238.1 Strain : Lactobacillus buchneri NRRL B-30929 Genome accession: NC_015428 Putative virulence/resistance : Unknown Product : acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0624 EC number : 3.5.1.18 Position : 2008069 - 2009214 bp Length : 1146 bp Strand : + Note : TIGRFAM: Acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase; KEGG: lbr:LVIS_0864 succinyl-diaminopimelate desuccinylase; PFAM: Peptidase M20; Peptidase M20, dimerisation DNA sequence : ATGGCGGTATTTTCAGAAGAACAACGGCTGCAAATTTTCAAAGAGCTCGTCGCGATTCAATCGGTGAACACTGATGAAGA AAAGGTCAGCGCTTATTTAAAAAATCTTTTTGAGAAACATGGCATTTCGGCCACAATTATCCCGGTCGATGAAAATCGGA CGGATCTAAAAGCAGAAATCGGCACTGGCAGCCCAGTCCTGGGAGTCTCCGGGCACATGGATGTCGTTTCACCGGGGGAT ACCTCTAAGTGGACCAGCGACCCGTTTACATTGACCGAGCGCGACGGCAAGTTATACGGTCGTGGTGCTGCTGATATGAA ATCCGGGTTGGCTGCAATGGTGATTGCCATGATTGAGATTCATGATCAAGGATTGCTGAAAAAGGGTCGGATTCGTCTCA TGGCAACCATGGGCGAAGAAGTTGGCGAATTAGGTTCACGAACCTTCGCTGACGATGGCTCAATGGACGACGTTGATGCA CTGATCATCGGTGAACCATCCGGCTACCGAATTGCCTATGCCCACAAAGGGTCAATGGATATTCGCCTAACCTCAACTGG GAAAGCTGCCCATAGTTCAATGCCGGAGCAGGGCTACAATGCGCTGGATCCACTGATTGATCTCCTGCACGACGCCAATC ATCAATTTAGAACAACAAATAAAAAGAGCGCAATGTTGGGAAATCTGGCATTTAACACGACGATCTTCAAGGGCGGGGAT CAAGTCAACTCAATTCCAGCCAAAGCTGTTGCCGATATCAACGTTCGCACCATCCCAGAGTTCGATAATGATGTGGTCGA TAAGCTACTGGATCAACTCGTTGAACAGCAAAATACCAACGGGGCCAAAATCGTCAAGGAAACTTACATGTCTCAACCAT CAGTCGAAACGACCGGCGACAAAAAGCTGATCGGCTTGGCACAGGAAATCGGCAAACAATATGCCGAAAAAGACATTCCG AGCGGTGCCATCCCAGCTGTCACCGACGCATCGAACATGCTGCGGGATAAGCCGAAGGAATTTCCATTTATCATCTTTGG TCCAGGAAGTAACAGTGTCCACCAAGTTGATGAGTTTGTCGACAAACAGATGTACCTTAACTTTGTGGAGATTTATCAGA AGTTGTTTACGCAGTATTTGAACTAA Protein sequence : MAVFSEEQRLQIFKELVAIQSVNTDEEKVSAYLKNLFEKHGISATIIPVDENRTDLKAEIGTGSPVLGVSGHMDVVSPGD TSKWTSDPFTLTERDGKLYGRGAADMKSGLAAMVIAMIEIHDQGLLKKGRIRLMATMGEEVGELGSRTFADDGSMDDVDA LIIGEPSGYRIAYAHKGSMDIRLTSTGKAAHSSMPEQGYNALDPLIDLLHDANHQFRTTNKKSAMLGNLAFNTTIFKGGD QVNSIPAKAVADINVRTIPEFDNDVVDKLLDQLVEQQNTNGAKIVKETYMSQPSVETTGDKKLIGLAQEIGKQYAEKDIP SGAIPAVTDASNMLRDKPKEFPFIIFGPGSNSVHQVDEFVDKQMYLNFVEIYQKLFTQYLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dapE | CAA07459.1 | succinyl-diaminopimelate desuccinylase | Not tested | Internalin | Protein | 5e-75 | 45 |
| unnamed | CAC20637.1 | - | Not tested | Internalin | Protein | 2e-75 | 45 |
