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Name : Lbuc_0020 (Lbuc_0020) Accession : YP_004397374.1 Strain : Lactobacillus buchneri NRRL B-30929 Genome accession: NC_015428 Putative virulence/resistance : Unknown Product : integrase family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 24058 - 25209 bp Length : 1152 bp Strand : - Note : PFAM: Integrase, catalytic core, phage; KEGG: lpj:JDM1_0030 prophage Lp3 protein 1, integrase DNA sequence : ATGGCAAGTATCAAGGGTTACACGTTAAAGAATGGCAACAAATGTTATTTATTTCAGGTCTACGCTGGTTTAGATCCCCA AACGGGTAAACCAAAGCGAATCATGAAAAGAGGCTTTAAAACAAAAAAAGAAGCCACCTTAGCAGCTAATCAATTGGAGT TATCAATTAGTCGAGGTGACTTCCATCAGGAAAGTAATATTCTGTTTAGACAAGTTTATGAACAATGGTATCAAGGATAT ATTAACACTGTCCGAGTTAGCACATATTGTCGAACAGCAGGGATGTTTGAGAATCACATTTTACCAGAACTGGGAAATAA AAGGATTCGTACAATTACCATTGCTCAAGTTCAACGAGCAGTTAATAAGTGGTTCAAACAGGCAACGTACAACTATAAGC GGTGGTATGAATACACGATGGCTATTTTTGATTACGCCTTAAAACACGGCTATATGCACGGTGATAATCCCGCTAAGATG ATTACCATCCCTAAACGTAAAGAAACTTGGGGTGAAAAGCCAGAAAACTTCTGGGATAAACAGCAACTTGCCCAATTCTT TAGTTACATTGATCCTAAAGAGGAATTAGAGAAATACACGCTGTTTCGAGTTCTAGCCTTTGCGGGGGTTCGTCGTGGTG AATGTTTAGCCTTAACTTGGAATGATGTTAATTTTAGCAAATCAACACTAAGTATCAACAAAACATTAACTCAAGGAATG CGTGGTAAGCAGATCATTCAACCACCGAAAACCAAGAAAGGTCAGCGGGTCATTGCTTTAGACAAAATTACGCTTAATTA CCTAAAACAATGGCGTGCCCGACAAAGGCGCGAATATTTAATGCTGGGATTCAATACGATTCAACGTGGTCAATTGATCT TTGCTAACAGTAATAATGGGTTTAAATCATTAAACACACCCGCTAAATGGTTGAATAAGATTATTAAAGCTCACAACCTA AAAAAGATAACCGTTCATGGTTTCCGTCACACTTCTGCAAGTATGTTATTTGCAGCCGGGGCAACCATTAAGGAAGTTCA AACTCGATTAGGTCATGAAGATGCTCAAACTACTTTAAATATTTACACCCACGTTACCAAAAAACAAGATAATCAAGCAG CCGAAAAGTTAGCAAATTACCTTGATTTTTAG Protein sequence : MASIKGYTLKNGNKCYLFQVYAGLDPQTGKPKRIMKRGFKTKKEATLAANQLELSISRGDFHQESNILFRQVYEQWYQGY INTVRVSTYCRTAGMFENHILPELGNKRIRTITIAQVQRAVNKWFKQATYNYKRWYEYTMAIFDYALKHGYMHGDNPAKM ITIPKRKETWGEKPENFWDKQQLAQFFSYIDPKEELEKYTLFRVLAFAGVRRGECLALTWNDVNFSKSTLSINKTLTQGM RGKQIIQPPKTKKGQRVIALDKITLNYLKQWRARQRREYLMLGFNTIQRGQLIFANSNNGFKSLNTPAKWLNKIIKAHNL KKITVHGFRHTSASMLFAAGATIKEVQTRLGHEDAQTTLNIYTHVTKKQDNQAAEKLANYLDF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sip | AAP55251.1 | integrase protein | Not tested | SaPIbov2 | Protein | 2e-72 | 45 |
| SAPIG0469 | YP_005733279.1 | integrase | Not tested | SAPI-S0385 | Protein | 4e-68 | 42 |
| SAOV_0414c | YP_005735930.1 | integrase | Not tested | SaPI1 | Protein | 3e-68 | 42 |
| SAB0342c | YP_415844.1 | integrase | Not tested | SaPIbov | Protein | 3e-68 | 42 |
| unnamed | AAG29618.1 | integrase-like protein | Not tested | SaPIbov | Protein | 2e-68 | 42 |
