Gene Information

Name : Lbuc_1759 (Lbuc_1759)
Accession : YP_004399070.1
Strain : Lactobacillus buchneri NRRL B-30929
Genome accession: NC_015428
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 1808386 - 1808586 bp
Length : 201 bp
Strand : -
Note : KEGG: lga:LGAS_0020 transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3

DNA sequence :
TTGAACAGAGTCCGGGAATATCGAAAGCAGGTAGGCATTTCCCAATTTGCCTTGGCTGAAAAAGTCGGGGTGGCCAGGCA
AACCATCAATTTGATTGAAAATGATAAGTACAATCCGTCGTTAAAATTGTGTATCAGCTTGGCGGAAGAATTGGGGACGG
ATTTAAACACACTATTTTGGAAGGTAGATGAAAATTCATGA

Protein sequence :
MNRVREYRKQVGISQFALAEKVGVARQTINLIENDKYNPSLKLCISLAEELGTDLNTLFWKVDENS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 6e-09 56
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 2e-04 44
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 1e-04 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lbuc_1759 YP_004399070.1 XRE family transcriptional regulator VFG2175 Protein 5e-05 44
Lbuc_1759 YP_004399070.1 XRE family transcriptional regulator VFG2168 Protein 5e-05 44