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Name : Lbuc_1738 (Lbuc_1738) Accession : YP_004399049.1 Strain : Lactobacillus buchneri NRRL B-30929 Genome accession: NC_015428 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1791786 - 1793069 bp Length : 1284 bp Strand : - Note : PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Seryl-tRNA synthetase, class IIa, N-terminal; TIGRFAM: Seryl-tRNA synthetase, class IIa; HAMAP: Seryl-tRNA synthetase, class IIa; KEGG: lps:LPST_C0813 seryl-tRNA synthetase DNA sequence : ATGTTAGATATTAAGAAAATCAGAAAAGATCCAGATTTTACCAAAGAAAAGCTCGCTACGCGGGGAACCAAGCCCGAAAC CATTGATGAATTAGTGGGCTACGATGCCAAACGTCGTGATTTGATCGTTGAATCCGAGTCCCTCAAAGCAAAGCGGAATG CCGTTTCTGACCAGATTTCACAAAAGAAGCGCAATAAAGAGGATGCAACTGAGGCCATCAACCAAATGAAACAGGTGGGC CAACGGATTAAGGAACTTGACGAGCAATTGCGTCAAGTTGAGGAAGATGAACACAATTTGGCTGCTCATCTGCCAAACAT ACCTCATGATGATGTCCCGGTGTCACTCACAGAAGAAGGATCCGTTGAGCTTCGTAAGATTGGTCAGATCCCGTCATTTG ATTTTGAACCAAAACACCATTGGGAAATCGGTGAAAATCTTGGCATCCTTGACTTTGAGCGGGCCGCAAAAGTGTCCGGC AGCCGGTTTGTTTACTATATTGGCGACGGGGCTTTACTGGAACGGGCCGTTTACAACTTCTACCTCGACCAAAATACCGC TGCCGGTTATACCGAAGTGATTCCACCTTACATGGTTAATAATGATTCAATGTATGGCACCGGGCAATTTCCAAAATTTT TGGAGAACAAATCCGGCTATGAGATTCAGGACAGTGATTTAACCCTGATTCCAACTGCCGAAGTTCCATTGGTTAACTAT TATCGCAATGAAGTTATTCCGACAGAAAAGCTGCCGGTATCGGTTACGGCCTTGTCACCGGCATTCCGATCGGAAGCAGG AAGTGCGGGCCGTGATACCAAGGGGCTGATTCGATTACACCAATTTAACAAGGTTGAAATGGTGAAATTTACCAAGCCCG AAGACTCGTGGAAGGCACTGGAAGAGATTACCCACCAAGCAGAAGTTAACCTGCAAAAACTCGGGTTGGCTTACCACGTT ATTACATTGACGACGAGTGATATGAGCTTCACAGCCGCTATGACCCACGATCTGGAAGTTTGGTTCCCAGCCCAGGATAA GTACCGGGAAATTTCCAGCTGTTCAAACTGTACAGACTTCCAGGCTCGCCGAGCACACATCCAGTATCGGGATGATGAAG GGAAGCTTCACTTTGTTCATACTTTAAATGGTTCTGGACTGGCAGTCGGCAGAACGGTGGCCGCCATTCTGGAAAATTAT CAGAATGAAGATGGCAGCGTCACGATCCCGGAAGTATTGCGGCCATATATGCACGGCATGACTAAAATTGAAAAGCAAAA CTAG Protein sequence : MLDIKKIRKDPDFTKEKLATRGTKPETIDELVGYDAKRRDLIVESESLKAKRNAVSDQISQKKRNKEDATEAINQMKQVG QRIKELDEQLRQVEEDEHNLAAHLPNIPHDDVPVSLTEEGSVELRKIGQIPSFDFEPKHHWEIGENLGILDFERAAKVSG SRFVYYIGDGALLERAVYNFYLDQNTAAGYTEVIPPYMVNNDSMYGTGQFPKFLENKSGYEIQDSDLTLIPTAEVPLVNY YRNEVIPTEKLPVSVTALSPAFRSEAGSAGRDTKGLIRLHQFNKVEMVKFTKPEDSWKALEEITHQAEVNLQKLGLAYHV ITLTTSDMSFTAAMTHDLEVWFPAQDKYREISSCSNCTDFQARRAHIQYRDDEGKLHFVHTLNGSGLAVGRTVAAILENY QNEDGSVTIPEVLRPYMHGMTKIEKQN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-128 | 62 |
