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Name : Lbuc_1559 (Lbuc_1559) Accession : YP_004398871.1 Strain : Lactobacillus buchneri NRRL B-30929 Genome accession: NC_015428 Putative virulence/resistance : Virulence Product : Lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 1599815 - 1601320 bp Length : 1506 bp Strand : - Note : PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: Lysyl-tRNA synthetase, class II; HAMAP: Lysyl-tRNA synthetase, class II; KEGG: lps:LPST_C0458 lysyl-tRNA synthetase DNA sequence : GTGGCCAAAGACAAAGAAATGAATGACCAAATGATCGTCCGTCGCCAGAAGATGGACGAATTACGCAAGGAAGGAATCGA TCCATTTGGACATCGATTCGTGCGTACATATCTTGCTGAACAACTGCATCATGATTTTGATGATGAAGATAAAGATGAAT TAATGGAAAAGGACAAGAAAGTTACCATTGCCGGCAGAATGATTGCTAAGCGGGGTAAAGGTAAGGTCGGTTTTGCCGAT TTAAAGGATCGAACTGGAAAAATCCAGATATATGTTCGTAAGGATATTGTCGGTGATGACATTTACCATATTTTTAAACG ATCCGACATTGGTGATCACCTCGGAATTTCCGGCCAAATTATCAAAACAGACATGGGTGAACTGACTGTTCGTGCAGAGT CAGTTACTTTCCTGTCAAAGGCGCTGCGGCCGCTACCAGATAAATTTCATGGCTTAAAGGACAAGGAACAGCGTTATCGT CAGCGCTACCTTGATCTCATTTCCAACCAGGACAGCTTCGATCGTTTTGTTAAGCGCACGAAGATTGTTTCTGCTGTCCG TAAGTATTTGGATTCAAACGATTATCAAGAAGTAGAAACCCCAGTTCTGCATAATTCTGCGGGTGGTGCGAATGCCCGTC CCTTTATTACCCATCACAATGCTTTGAATATCGACTTGTATTTAAGAATTGCGCTTGAACTGCATTTGAAGCGATTGATT GTGGGTGGACTGGAACGGGTCTATGAAATTGGCCGGGTCTTCAGAAATGAAGGAATGGATACCCGTCATAATCCGGAGTT CACGATGCTTGAATCCTATGTTGCCTATTATGACTTCCATGATGTGATGGATGAAACTGAGGGCATCTTTAAGGCAGCAG CAGCTGCTGTTACGGATGATAATGTTGTGACTTATCAAGGCCACACCGTTGACTTGAACAAACCGTTTAAACGACAGCAT ATGGTTGATGCAATTAAGGAATATACCGGAATTGATTTTTGGCAACCAATGTCTGATGATGACGCTAAAAAATTGGCTGA TGAACACCATATTCATTACGAACCATGGTGGAAGACCGGCCATATTATTAATGCATTTTTTGAGGAGCTCGTTCAACCTA AGCTGGAGCAGCCAACATTTATTTATGGGCATCCGGTTGAGATTTCACCACTGGCCAAGAAGAACCATGATGATCCAAGA TTTACCGATCGTTTTGAGTTATACATTTTGACTAACGAGTTCGCCAATGCATTTTCTGAATTGAATGACCCAATTGATCA GCGTCAACGATTTGAGGCTCAAGTTGCTGAACGTAAAGCTGGTAACGAAGAGGCTGAAGGAATTGATGAAGACTACATTG AAGCCCTTGAGTATGGCATGCCGCCAACGGGTGGACTTGGAATCGGCATTGATCGACTGGTTATGTTATTGACCGATGCA CCATCTATTCGTGACGTGATTCTGTTCCCAACAATGCGTCCCGAGGATAATACGAATAACGATTAA Protein sequence : MAKDKEMNDQMIVRRQKMDELRKEGIDPFGHRFVRTYLAEQLHHDFDDEDKDELMEKDKKVTIAGRMIAKRGKGKVGFAD LKDRTGKIQIYVRKDIVGDDIYHIFKRSDIGDHLGISGQIIKTDMGELTVRAESVTFLSKALRPLPDKFHGLKDKEQRYR QRYLDLISNQDSFDRFVKRTKIVSAVRKYLDSNDYQEVETPVLHNSAGGANARPFITHHNALNIDLYLRIALELHLKRLI VGGLERVYEIGRVFRNEGMDTRHNPEFTMLESYVAYYDFHDVMDETEGIFKAAAAAVTDDNVVTYQGHTVDLNKPFKRQH MVDAIKEYTGIDFWQPMSDDDAKKLADEHHIHYEPWWKTGHIINAFFEELVQPKLEQPTFIYGHPVEISPLAKKNHDDPR FTDRFELYILTNEFANAFSELNDPIDQRQRFEAQVAERKAGNEEAEGIDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDA PSIRDVILFPTMRPEDNTNND |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-111 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Lbuc_1559 | YP_004398871.1 | Lysyl-tRNA synthetase | VFG1668 | Protein | 8e-112 | 47 |
