Gene Information

Name : Lbuc_1524 (Lbuc_1524)
Accession : YP_004398837.1
Strain : Lactobacillus buchneri NRRL B-30929
Genome accession: NC_015428
Putative virulence/resistance : Unknown
Product : peptidase S14 ClpP
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0740
EC number : -
Position : 1570836 - 1571537 bp
Length : 702 bp
Strand : -
Note : PFAM: Peptidase S14, ClpP; KEGG: lrf:LAR_1060 phage Clp-protease

DNA sequence :
ATGACAACAGTACCAATTAAAGGTGTTGTATCTAGTGATGATGATGCTGAAGTATATGAATTCTTTGGCTATTCAACAGT
TACTCCTTCCGCAGTTAAAGATGCGTTAAGCACTGCAAATGGTCAAAATATTGTTGCCGAAATTAATTCACCTGGTGGCG
ATGTGTTTGCGGGTTCTGAAATATATACCGCACTTAAGAATTATACCGGTAATGTGGAAGTTGACATTGTTGGATTAGCA
GCGAGTGCGGCCAGTGTCATTGCAATGGCTGGTGATACGATTAAAATTTCGCCAACGGCTCAATTAATGATTCATCGGGC
TTCCACTGTATCTCAAGGGAATGCAGATGATTTATCCAGCGATTTGCAGGGGTTGAACTCGACTGATCAATCAATTGCAA
ATGTTTATGTGCAACGAACGGGTTTGGATCCGCAAACAGTCATGCAAATGATGGCCAAGGAAACTTATATCAATGCAAAA
GATGCCGTTGAACAAGGATTTGCAGACGAAATGATGTTTGCAGATCAACCAGCCAAAGTTACTAACATGATGTCGCCCTT
GATGTTGAGTAATCAGGCAATTAGTAAAATTAAATCATTGTTAACCAAAGTAAAAGAAAAGCCTAAAGAAACTAATAGCC
AAACTAGTGACCAATTACGATCACATAAGTTGGCTATTTTATTTAAGAAAGAAGGAAATTAA

Protein sequence :
MTTVPIKGVVSSDDDAEVYEFFGYSTVTPSAVKDALSTANGQNIVAEINSPGGDVFAGSEIYTALKNYTGNVEVDIVGLA
ASAASVIAMAGDTIKISPTAQLMIHRASTVSQGNADDLSSDLQGLNSTDQSIANVYVQRTGLDPQTVMQMMAKETYINAK
DAVEQGFADEMMFADQPAKVTNMMSPLMLSNQAISKIKSLLTKVKEKPKETNSQTSDQLRSHKLAILFKKEGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_0824 YP_002746160.1 phage ClpP protease Not tested ¥ÕSeq2 Protein 2e-26 44
SAOV_1103 YP_005736598.1 Prophage Clp protease-like protein Not tested ¥ÕSa2 Protein 1e-27 42
SAV1964 NP_372488.1 phiN315 scaffolding protein-like protein Not tested ¥ÕSa3 Protein 5e-28 42
SA1775 NP_375073.1 hypothetical protein Not tested ¥ÕSa3 Protein 5e-28 42
SAUSA300_1939 YP_494590.1 phi77 ORF015-like protein protease Not tested ¥ÕSa3 Protein 5e-28 42
SAUSA300_1939 YP_494590.1 phi77 ORF015-like protein protease Not tested ¥ÕSa3 Protein 5e-28 42
SAKOR_01943 YP_008492131.1 ATP-dependent endopeptidase clp proteolytic subunit clpP Not tested ¥ÕSa3 Protein 5e-28 42