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Name : Lbuc_1490 (Lbuc_1490) Accession : YP_004398807.1 Strain : Lactobacillus buchneri NRRL B-30929 Genome accession: NC_015428 Putative virulence/resistance : Unknown Product : Tex-like protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 1533226 - 1535394 bp Length : 2169 bp Strand : - Note : KEGG: lbr:LVIS_0546 transcriptional accessory protein; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA-binding domain; SMART: Resolvase, RNase H-like fold; RNA-binding domain, S1 DNA sequence : ATGGACAACACATTAGCACATAAGATTCAGCAAGACTTACCCAAAATCCGGGAGAAACAGATCGTCGAAACCCTCAAGAT GTTGGATGAAGGTGACACCGTTCCTTTTATTGCCCGGTATCGAAAAGAACGGACTTCCAATCTGGATGAAGTTCAAATTC GAGACATTCAAGACGCTGCTCATCGCATCCAAACTTTGGACAAGCGCAAGCAGGAAGTCATCAAAATTATTGATGAACAA AAGGCCTTAACCCCCGAACTGAAAAAGCAGATTGAGGCGGCCTCGGTTCTTCAACAAGTTGAAGATCTTTATTTGCCCTA CAAACAAAAACGGCGGACGAAAGCGACAATTGCCAAAGAACATGGTTTGGAGCCCTTAGCCAAAGCCGCCATGTCGTTTG CCCCCGATTTGAAGCAACTGGCTGCGCAGTATGTTCACCCGGACAAAGAACTGCCTGATGTTGACGCAGTCTTCGCCGGA GTCCACGAAATTATCGCTGAAGACGCTGGCGACCGGGCCGATTTTCGCGAATGGGTCCGCCAAAACACCCAACGATACGG TCAGTTGGTTGTCAAAGTTAAACGCGGTGGTAAAGAGTTGGACGAAGAGGGCACCTATCAGCAGTATTACGATTTCAATC AACCCATCAAATCAATTCCTTCGTTTAGAACCTTGGCCATTAACCGGGGTGAAAAAGAGAAAGTGCTTTCGGTCAAAATT GAAGTCAATGAGGCACCAATCATGTGGCATTTAAAGGCCAACACCGTCGGCAGTCATCAAGGATTTGCTGCCGATGTGGT CACCGATGCAATCGAAGATGCCTATCACCGCTTCATCGGACCGGCAATCGAGCGTGAAATCCGCAAGCAGTTGACCGAAG TGGCCGCTGATCACGCCATCGATATCTTTGGCAAGAATTTGTACAACTTGCTGATGCAGGCGCCACTCAAGGGCAAAATT GTCATGGGATTTGACCCGGCCTATCGAACCGGCTGTAAATTAGCGGTGGTCGATCAAAATGGCAAGTATCTGGACAAAAC GGTAATCTATCCCCATAAGCCTGCCAGTGAAGCCAAACGTAAGGCTGCCAAAGGGCTGTTCATTGATTTCATCAACCAAA ATCACGTTGAAATGATCGCCATCGGTAACGGAACCGCTAGTCGGGAGTCTGAACAATTTGTTGCCGATGCAATTAAAGAA ATCAAAACGCCCATTTATTACGTAATTGTTAATGAGGCAGGGGCGTCGGTCTATTCTGCAAGTCAAGTCGCCAGAGACGA ATTTCCGGACTTTAGTGTTGAACAGCGTTCGGCTGTCAGTATTGCCCGCAGAATCCAAGATCCCCTTGCCGAATTAGTTA AAATTGATCCCCAGGCAATTGGTGTCGGTCAATATCAACACGATGTTCCGCAGAAACAACTGGGTGAACAGTTGGACACG GTGGTTGAAACCGCCGTTAACCGGGTTGGCGTTAATTTGAACACTGCCAGTCCCGATCTGTTGGTCCACATTTCCGGGTT GACCAAAACGACCAGCGGCAATATCGTCAAATTCAGAAATGAAAATGGCGAATTTAGTGCTCGCTCTGATCTCAAACAAG TTCCCCGGCTCGGCCCGAAAGCTTTTGAGCAATCGGTGGGGTTCTTGAGAATCATCGGCGGCAAAAATCCACTGGATAAC ACCGATATTCATCCGGAAAGTTATTCTGCGGCCAAAAGCCTCCTGAAAAAGCACGGATTGACCATTAATCAACTCGGCGA GCCGGCCGTTTCAACTGCTTTGAGTCAGCTCAATTTGGCCCAGGAAGCTGAAAGCATCGGAGTTGGGGTTGCAACCTTGA AAGATATTATCAAGGGCCTCGAAACGCCTGGCCGTGACTTGCGTGACGAAATGCCTGCACCGTTGCTTCGAAAAGACGTT TTGACAATGGAAGATTTGAAGCCGGGGATGAAACTGCAGGGAACTGTCAGAAACGTGGTTGACTTTGGTGTCTTTGTTGA TATTGGCGTTAAGCAGGACGGTTTGGTCCACATTTCCAAAATGAGTCGGACATTCGTCAAGGATCCCAGCAAGGTGGCTT CGGTCGGCGACATCGTGACGGTTTGGATTGACTCAGTGGATCTGGATCGTCACCGGATTCAATTAACCATGGTGGATCCT GAAGGTTAG Protein sequence : MDNTLAHKIQQDLPKIREKQIVETLKMLDEGDTVPFIARYRKERTSNLDEVQIRDIQDAAHRIQTLDKRKQEVIKIIDEQ KALTPELKKQIEAASVLQQVEDLYLPYKQKRRTKATIAKEHGLEPLAKAAMSFAPDLKQLAAQYVHPDKELPDVDAVFAG VHEIIAEDAGDRADFREWVRQNTQRYGQLVVKVKRGGKELDEEGTYQQYYDFNQPIKSIPSFRTLAINRGEKEKVLSVKI EVNEAPIMWHLKANTVGSHQGFAADVVTDAIEDAYHRFIGPAIEREIRKQLTEVAADHAIDIFGKNLYNLLMQAPLKGKI VMGFDPAYRTGCKLAVVDQNGKYLDKTVIYPHKPASEAKRKAAKGLFIDFINQNHVEMIAIGNGTASRESEQFVADAIKE IKTPIYYVIVNEAGASVYSASQVARDEFPDFSVEQRSAVSIARRIQDPLAELVKIDPQAIGVGQYQHDVPQKQLGEQLDT VVETAVNRVGVNLNTASPDLLVHISGLTKTTSGNIVKFRNENGEFSARSDLKQVPRLGPKAFEQSVGFLRIIGGKNPLDN TDIHPESYSAAKSLLKKHGLTINQLGEPAVSTALSQLNLAQEAESIGVGVATLKDIIKGLETPGRDLRDEMPAPLLRKDV LTMEDLKPGMKLQGTVRNVVDFGVFVDIGVKQDGLVHISKMSRTFVKDPSKVASVGDIVTVWIDSVDLDRHRIQLTMVDP EG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 1e-120 | 43 |
