Gene Information

Name : Lbuc_1310 (Lbuc_1310)
Accession : YP_004398627.1
Strain : Lactobacillus buchneri NRRL B-30929
Genome accession: NC_015428
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0691
EC number : -
Position : 1375645 - 1376118 bp
Length : 474 bp
Strand : -
Note : TIGRFAM: SsrA-binding protein; HAMAP: SsrA-binding protein; KEGG: lbr:LVIS_0670 SsrA-binding protein; PFAM: SsrA-binding protein

DNA sequence :
ATGGCCAAAGGCAAAAAGCAGCATAATAACGATAATTTGATGGCGCAAAATAAAAAAGCTCGTCATGATTATTCGATTTC
CGAAACCTACGAAGCTGGAATTGTGCTGACAGGTACCGAAATTAAATCGATTCGTGCTCGGCGAATTAACCTAAAGGATG
GCTTTGTTCAAATTCGAAACGATGAGGCCTACATGATGAACGTTCACATCAGTGAGTACGCTGAGGGGAACCAATTTAAT
CATGATCCGCTGCGCAATCGAAAGTTGTTGCTGCACAAAAAGCAAATTCGCAAATTGGCTCAAATTACCCAAGACAAAGG
GGTCACAATCGTTCCTTTAAAGGTCTACCTCAAAAATGGTTTTGCCAAAGTTTTAATTGGGGTAGCAACCGGTAAGCATG
AGTACGATAAGCGTGAAACCATCAAGCGACGTGATCAAAAGCGTCAAATTGAACGAGTTATGAAACATTATTAA

Protein sequence :
MAKGKKQHNNDNLMAQNKKARHDYSISETYEAGIVLTGTEIKSIRARRINLKDGFVQIRNDEAYMMNVHISEYAEGNQFN
HDPLRNRKLLLHKKQIRKLAQITQDKGVTIVPLKVYLKNGFAKVLIGVATGKHEYDKRETIKRRDQKRQIERVMKHY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 3e-39 60
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 7e-29 43