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Name : Lbuc_1217 (Lbuc_1217) Accession : YP_004398535.1 Strain : Lactobacillus buchneri NRRL B-30929 Genome accession: NC_015428 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : - Position : 1277186 - 1279840 bp Length : 2655 bp Strand : - Note : TIGRFAM: DNA polymerase 1; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, alpha-helical arch, N-terminal; 5'-3' exonuclease, SAM-fold domain; KEGG: lps:LPST_C1188 DNA-directed DNA polymerase I; SMART: 5'-3' exonuclease, N-ter DNA sequence : ATGACTAAAAAATTATTATTAATTGATGGTAATAGTATTGCCTTCAAAGCGTTTTATGCTTTATACACGGCCATGGACAA ATTTACCAATCCATCTGGCCTACATACCAGCGCCATTTATGGCTTTAACCGGATGTTGGACAAAGTATTAGCAGACGAGA AGCCCACCGATGTGCTGGTCGCATTTGATGCCGGCAAAACCACTTTTCGAACGAAAATGTACGCTGATTATAAAGGCGGT CGAGCTAAGACACCAACTGAACTTTCCGAGCAATTTCCCTTCTTAAAAGAATTGATCAACGCCCGCGGCATTTCCACCTA TGAATTACCGGATTATGAGGCCGATGATATTATTGGAACGCTCGCCAAAAAGGCTGAAGAAGCTGGTGACTACCAAGTTG TGATTGTCACCGGCGATCGAGATTTGACCCAGTTAACTTCAGATAAGACCACGGTTCAGGTTTCTAAAAAGGGTGTCACC GAACTGGAAACATATACCCCCAAACACGTCGAAGAAAAGCTGGGTGTTAAACCGAGCCAGATTATTGAAATTAAGGGTCT GAAAGGCGACAACTCCGACAACTATCCCGGCGTTGAAAAAGTCGGTGACAAGACAGCTGTCAAGCTGGTTCAACAATTTG GCACGATTGACAATCTCTATCAAAATATCGACCAGGTTTCCGGTAAAAAATTAAAGGAACATTTGATTCATGACCAAGCC CAGGCCGAGCGCGCCCACACGTTGGCAACAATCAACCGCGACGCGCCGGTAACAGTCTCTTTGGATCAGTTGAAGTATCA GGGAGACAATATCGATAAACTGACCGATTTTTACGAGAGAATGGGCTTCAAATCGTTTCTGGCCAAGTTATCTGTTGATG ATCAGGATCATGCCGACGATCAAGCAGATATTCAATACACTGTCTTGTCCGCCAAGAATGCGGCTGAGCTGGATCAGTTC ACAGATGAAGTGACTTTTCACCTGGAAATGTCAGAAGAAAACTACCACACATCGCCATTGGTTGGCTTTGCGATTGGACA GGGTAACAAATGGTATGTGACCAACGATCCTGAATTGCTTCACAATCAGCATGTCAGTGACCTCCTGACCAGCAAGACCA TCAAAAAGAACCTTTTTGATGCCAAACGAACCTATGTCGGTCTTTATCGACAAGGGATTGAGCTTGCCAACGTGGACTTC GATATGCTGCTGGTATCATATTTGCTTAATACAACTAATAATAGCAACGACGTCGGCACCGTTGCCCATTTACACGGATT CTATAATGTTAAAACCGATGAAGAAGTCTATGGAAAGGGTGCCAAGCGACACATTGACCCGCAATCACCTGCCTTTTTGG CCCATTTGGTTCATAAGGTCAAAGCGATTGATGCTCTTCACGACGGGATGTTTAAGGATCTGGATGCCCATAATCAATCC AAACTGTACTGGGATATCGAAATCAAGATTGCCTTTGTCCTTGCCCACATGGAAATCAATGGCATCAAAGTTGATGCAGC CACTTTGGAGGGCATGGGCAGTAAGTTTAAAGAGCGGCTCGCTGAAATTGAACAGACCATTTTCCAAGAAGCTGGTGAAG AATTTAACATTGGTTCTCCCAAACAACTGGGAAAGATTCTGTTTGAAAAGCTCCGCCTGCCGATTCTAAAGAAGACCAAA ACCGGCTATTCGACCTCGGTTGATGTTTTGGAGAAACTGGCTCCGGATGCACCAATTGTTCAAAATGTGTTGGACTACCG TCAGATTTCCAAACTACAGTCGACATATGTTGATGGGCTATTAAAGGTCATTCATCCAGATGATTCCAAAGTTCACACCA GATATCTGCAGACGTTAACCCAGACTGGTCGATTGTCTTCAGTCGATCCCAATCTGCAGAATATTCCGGTTCGCTCCGAG GAAGGCCGACTTATTCGCCAGGCCTTTATTCCATCACATCCAGGCTGGCAGATTTTCTCCTCTGATTATTCTCAAATTGA ACTGCGGGTGTTGGCGTCAATTACCGACGACCAAAATATGCAGGACGCCTTTAAAAATGGCGAGGATATTCATGCCACCA CGGCACGGAGAATTTTTGGACTGCCGTCAAATGAAGAAGTCACCCCGGAACTTCGGCGTCAGGCCAAGGCAGTTAACTTT GGGATTGTTTATGGGATTAGCGATTTTGGTTTAGCGTCCAATACCGGCATTACCAGAAAACAGGCGCATCAGTTTATTGA ACGTTATTTTGAAGAATATCCCGGCGTTAAAAAATATACCGAAGACATCGTTGAATTTGCCCGTAACCACCGCTACGTTG AGACGATTGCCCATCGACGCCGTTATTTGCCGGATATTAATTCCAAGAGCTTTAATCTGCGTTCATTCGCTGAACGGACT GCCATGAACACACCAATCCAAGGCAGTGCGGCCGACATCATCAAAATTGCGATGATTAATATGGCCGATGCAATCAAGGA TATGAAAACCCGCATGCTGCTGCAGGTTCACGATGAATTAATTTTTGAAGTTCCTGACGAGGAATTGGACACCGTCAAAC AACTGATTCCAAGCGTCATGGATTCAGCGATCCACTTGAATGTGCCATTAAAAGTTGAAAGCCACTGGGGTAAGACCTGG TATGATGCAAAATAA Protein sequence : MTKKLLLIDGNSIAFKAFYALYTAMDKFTNPSGLHTSAIYGFNRMLDKVLADEKPTDVLVAFDAGKTTFRTKMYADYKGG RAKTPTELSEQFPFLKELINARGISTYELPDYEADDIIGTLAKKAEEAGDYQVVIVTGDRDLTQLTSDKTTVQVSKKGVT ELETYTPKHVEEKLGVKPSQIIEIKGLKGDNSDNYPGVEKVGDKTAVKLVQQFGTIDNLYQNIDQVSGKKLKEHLIHDQA QAERAHTLATINRDAPVTVSLDQLKYQGDNIDKLTDFYERMGFKSFLAKLSVDDQDHADDQADIQYTVLSAKNAAELDQF TDEVTFHLEMSEENYHTSPLVGFAIGQGNKWYVTNDPELLHNQHVSDLLTSKTIKKNLFDAKRTYVGLYRQGIELANVDF DMLLVSYLLNTTNNSNDVGTVAHLHGFYNVKTDEEVYGKGAKRHIDPQSPAFLAHLVHKVKAIDALHDGMFKDLDAHNQS KLYWDIEIKIAFVLAHMEINGIKVDAATLEGMGSKFKERLAEIEQTIFQEAGEEFNIGSPKQLGKILFEKLRLPILKKTK TGYSTSVDVLEKLAPDAPIVQNVLDYRQISKLQSTYVDGLLKVIHPDDSKVHTRYLQTLTQTGRLSSVDPNLQNIPVRSE EGRLIRQAFIPSHPGWQIFSSDYSQIELRVLASITDDQNMQDAFKNGEDIHATTARRIFGLPSNEEVTPELRRQAKAVNF GIVYGISDFGLASNTGITRKQAHQFIERYFEEYPGVKKYTEDIVEFARNHRYVETIAHRRRYLPDINSKSFNLRSFAERT AMNTPIQGSAADIIKIAMINMADAIKDMKTRMLLQVHDELIFEVPDEELDTVKQLIPSVMDSAIHLNVPLKVESHWGKTW YDAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 0.0 | 53 |
