Gene Information

Name : Lbuc_0115 (Lbuc_0115)
Accession : YP_004397468.1
Strain : Lactobacillus buchneri NRRL B-30929
Genome accession: NC_015428
Putative virulence/resistance : Resistance
Product : protein tyrosine phosphatase
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0394
EC number : 3.1.3.48
Position : 121414 - 121848 bp
Length : 435 bp
Strand : +
Note : SMART: Protein-tyrosine phosphatase, low molecular weight; TIGRFAM: Arsenate reductase StaphA (thioredoxin); KEGG: dhd:Dhaf_1210 arsenate reductase (thioredoxin); PFAM: Protein-tyrosine phosphatase, low molecular weight

DNA sequence : 
ATGGGCCAAAAGACAATCTATTTTCTCTGCACTGGTAATTCCTGCAGAAGCCAAATGGCGGAAGGTTTTGGCAAACAATA
TTTGGGTGACCACTATCGGGTGTTCTCGGCTGGAATTGAAAAGCACGGCGTCAACCCAATGGCTGTTCAAGTCATGGCCG
AAGCTGGTGTGGATATTTCTAGCCAAACCTCCAAGCTGATTGACCCGACAATTTTAAACCACGCTGACTTGGTGGTTACG
CTGTGCAGTGATGCCGAGAAACGTTGTCCGATAACGCCACCGCAAGTCGCCCGTCAACATTGGCCTTTTCCTGATCCGGC
CGCTGCAACCGGCAGTTCCAGTGAACAATTACAGGTTTTTCGAGAAGTTCGCGACGCCATCAAGGCGCGGATAATTGACT
TTGCCAATCTTGAGGCCGACCAAAAAAATCATTAG

Protein sequence : 
MGQKTIYFLCTGNSCRSQMAEGFGKQYLGDHYRVFSAGIEKHGVNPMAVQVMAEAGVDISSQTSKLIDPTILNHADLVVT
LCSDAEKRCPITPPQVARQHWPFPDPAAATGSSSEQLQVFREVRDAIKARIIDFANLEADQKNH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC YP_252023.1 arsenate reductase Not tested SCCmec Protein 1e-36 59
arsC YP_005754064.1 arsenate reductase Not tested Type-XI SCCmec Protein 8e-35 56
arsC YP_252016.1 arsenate reductase Not tested SCCmec Protein 2e-36 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lbuc_0115 YP_004397468.1 protein tyrosine phosphatase BAC0581 Protein 1e-41 63
Lbuc_0115 YP_004397468.1 protein tyrosine phosphatase BAC0032 Protein 5e-36 58
Lbuc_0115 YP_004397468.1 protein tyrosine phosphatase BAC0580 Protein 1e-35 56