Gene Information

Name : Lbuc_1111 (Lbuc_1111)
Accession : YP_004398432.1
Strain : Lactobacillus buchneri NRRL B-30929
Genome accession: NC_015428
Putative virulence/resistance : Unknown
Product : heat shock protein HslVU, ATPase subunit HslU
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1220
EC number : -
Position : 1177302 - 1178714 bp
Length : 1413 bp
Strand : -
Note : TIGRFAM: Heat shock protein HslU; PFAM: ATPase, AAA-2; KEGG: lbr:LVIS_0801 ATP-dependent protease ATP-binding subunit HslU; SMART: ATPase, AAA+ type, core

DNA sequence :
TTGACTGAGTCTACTCAAACACCAAAAGAAATTGTTTCCGTGCTTGACCAATATATTGTTGGCCAAAACGAGGCCAAAAA
AGCGGTTGCTGTGGCCTTGCGGAACCGATACCGCAGAATGCAGCTGTCAAAAGACATGCAGGATGAAATTTCACCAAAAA
ACCTTTTGATGATTGGACCGACCGGAGTTGGGAAAACTGAAATTGCCCGCCGTTTGGCTAAAATAGTTAACGCACCGTTT
GTGAAGGTTGAGGCTACCAAATTTACCGAAGTCGGTTACGTGGGTGGCGATGTTGAATCAATGGTTCGTGACCTGGTCGA
AAATGCCATCCAATTGGAACGGGCTGATCAGTACAAACAGGTCCATGTCGAGGCAGAAAAGCAGGCCAACAATCGCTTGG
TCAAACTTTTGGCACCGGCAAAGAAAAAAGAGAACCGCCAAAATGAGATGCAGAACCTGATGAATATGTTTACTCAGATG
CAAAATGGCCAGATGCCGTCTGAAAATCAGGACGATCAAGAAGAAGTAACTGATGATATCCGTGAAAAACGGATGTCGAT
CGCAGAAAAACTCAAGGCCGGTTTGCTGGAAAACGACCAGGTTGAAATTGAAATGGATGATCCATCCCAACAACCCGCTG
GTCAAAGCACGATGATGAACCAAATGGGGATCGATTTGAATGATACCTTAGCCGGACTGATGCCCAAAAAGAAAATCAAG
CGCACCGTCCCTGTAAGCGAAGCGCGTGAAATTCTAACCCGCCAGGCTTCTGAGGAATTGATCAACAAGGCCGATCTTTA
CCATAATGCGATCGTTCGCGCCGAAAATACCGGAATCATCTTTATTGATGAAATTGATAAGATTGCTCCGGGAAAGTCTC
AAAACAGTGGCGAAGTTTCCCGTGAAGGGGTTCAACGCGACATTTTGCCAATCGTTGAAGGCTCTCAGGTGAATACCAAA
TATGGGACCGTCAACACGGATCACATGCTCTTCATTGGTTCGGGTGCCTTTGCCGAAAACAAGCCCTCTGATTTAATTCC
AGAACTCCAAGGACGTTTCCCAATCAGAGTTGAGTTAAATGATTTAACCAAAGAAGACTTTGTCCGCATTTTGACAGAAC
CAACCAACTCATTGACCAAACAATACATTGCGTTGATCGGGACTGATAATATCAAAGTAACCTTCACCATTGAGGCGATT
AATCGAATTGCCGAGATTGCTACTGACGTCAACCACAATACTGATAATATCGGTGCCCGTCGTCTGCACACGATTCTTGA
GAAACTGCTTGAAGATATCCTTTACGAAGGACCGGATATGCAGATGGGCGATATTACGATCACTGAAAAATACGTCGATG
ATAAAGTTGGCAAACTGGCTCAAAATAAAGATCTTTCACGTTACATTCTGTAA

Protein sequence :
MTESTQTPKEIVSVLDQYIVGQNEAKKAVAVALRNRYRRMQLSKDMQDEISPKNLLMIGPTGVGKTEIARRLAKIVNAPF
VKVEATKFTEVGYVGGDVESMVRDLVENAIQLERADQYKQVHVEAEKQANNRLVKLLAPAKKKENRQNEMQNLMNMFTQM
QNGQMPSENQDDQEEVTDDIREKRMSIAEKLKAGLLENDQVEIEMDDPSQQPAGQSTMMNQMGIDLNDTLAGLMPKKKIK
RTVPVSEAREILTRQASEELINKADLYHNAIVRAENTGIIFIDEIDKIAPGKSQNSGEVSREGVQRDILPIVEGSQVNTK
YGTVNTDHMLFIGSGAFAENKPSDLIPELQGRFPIRVELNDLTKEDFVRILTEPTNSLTKQYIALIGTDNIKVTFTIEAI
NRIAEIATDVNHNTDNIGARRLHTILEKLLEDILYEGPDMQMGDITITEKYVDDKVGKLAQNKDLSRYIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 3e-92 45