Gene Information

Name : Lbuc_0105 (Lbuc_0105)
Accession : YP_004397459.1
Strain : Lactobacillus buchneri NRRL B-30929
Genome accession: NC_015428
Putative virulence/resistance : Unknown
Product : C4-dicarboxylate anaerobic carrier-like protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1288
EC number : -
Position : 109774 - 111321 bp
Length : 1548 bp
Strand : +
Note : PFAM: C4-dicarboxylate anaerobic carrier-like; KEGG: lbr:LVIS_2028 C4-dicarboxylate anaerobic carrier DcuC

DNA sequence :
ATGGACGCACAAGTCGAAAAACCAAAGAAGCATTTCAAGCTGAAAATGCCCGGTGCCTTTGTCATTCTGTTCATTTTGAC
AATCGTTGCCGTGGCTGCCACCTGGATGGTTCCTGCCGGTAGTTATTCAAAATTATCGTACACGAATTCATCTTTGCAGG
TAACTGACCCACACGGTAAAGTCACCACGGTTCCCAGCACCCAAAAAGAATTAGACAAGCTGGGCGTCAAAATTAACATT
AAGCAATTTACAGATGGCGGCATCACTGCGCCGGTATCAATTCCAAATACTTACCAGCGACTCAAACAGCGGCCGGCAAG
CATTGCGGCTGTCCCGACCAGCATGGTCAAAGGGACCATTGAAGCCGTCGATATTATGGTCTTCATCCTGGTTCTGGGAG
GCTTGATCGGAGTCGTCAAAGCCAGTGGCGCTTTTGAATCCGGTCTGCTGGCCCTGACCAAGAAGACCAAAGGGCATGAG
TTCTTGCTGATCTTCTTCGTTGCCATCCTGATGGTTCTGGGTGGAACCCTTTGTGGGATCGAAGAAGAAGCGGTCGCCTT
TTATCCAATTCTGGTACCGATTTTCATTGCTATGGGGTACGATTCGATCGTGTCTGTTGGCGCAATCTTCCTCGCGAGTT
CGATTGGAACCTGTTTTTCAACCATCAACCCGTTTTCCGTGGTGATTGCGTCTAACGCTGCCGGCATCGACTTTACCCAA
GGTCTGCCGGAGCGGGCCATTGGTTTGGTGATTGCTGCCAGTTTTGTCGTGACTTATCTGCACTGGTACAGCAAGAAAGT
TAAAGCTGATCCAAAGTTTTCTTACTCCTATGACGACCGTGACGAATTTAATGCAATGTGGGAAATTGCCCCAACCGGGG
AAGATGCCAAATCCAAATTTACAATGCGTAAAAAGCTGATTTTGATATTATTCGTTGTCACCTTCCCACTGATGGTTTGG
GGCGTTATGTCTCAAGGTTGGTGGTTCCCAACCATGGCGGCTTCATTCCTGTCATTTGCAATTATCATCATGTTCCTAAC
GGCAACTGGTAAAAATGGGCTTGGAGAAACGGGTGTCGTTGATGCTTTCGTGAAAGGTGCTTCCAGCTTGGTTGGCGTTT
CGCTGATCATTGGCTTGGCACGGGGAATTAATCTTGTGCTGAATAACGGGAAGATTTCTGACACCATGCTCCAGTATTCA
TCAACCTTGGTTGCCCATATGAACGGTCCAATGTTTATTGTTGTGATGCTGATCATCTTCTTCCTGTTAGGATTCATCGT
CCCATCTTCATCAGGCTTGGCGGTGCTGTCGATGCCGATTTTGGCACCGTTGGCCGATACGGTTCACATTCCACGTTATG
TCGTGGTAACTGCCTATCAGTTCGGTCAGTATGCAATGCTGTTCCTGGCCCCAACCGGGTTGGTGATGGCAACCTTGCAA
ATGCTGAACATGAAGTATTCACACTGGCTGCGTTTCGTGTGGCCGGTGGTTGTCTTCGTCCTCGTGTTCGGTGGTGCATT
GCTGGTAACTGAAGTTTTGATTAATTAA

Protein sequence :
MDAQVEKPKKHFKLKMPGAFVILFILTIVAVAATWMVPAGSYSKLSYTNSSLQVTDPHGKVTTVPSTQKELDKLGVKINI
KQFTDGGITAPVSIPNTYQRLKQRPASIAAVPTSMVKGTIEAVDIMVFILVLGGLIGVVKASGAFESGLLALTKKTKGHE
FLLIFFVAILMVLGGTLCGIEEEAVAFYPILVPIFIAMGYDSIVSVGAIFLASSIGTCFSTINPFSVVIASNAAGIDFTQ
GLPERAIGLVIAASFVVTYLHWYSKKVKADPKFSYSYDDRDEFNAMWEIAPTGEDAKSKFTMRKKLILILFVVTFPLMVW
GVMSQGWWFPTMAASFLSFAIIIMFLTATGKNGLGETGVVDAFVKGASSLVGVSLIIGLARGINLVLNNGKISDTMLQYS
STLVAHMNGPMFIVVMLIIFFLLGFIVPSSSGLAVLSMPILAPLADTVHIPRYVVVTAYQFGQYAMLFLAPTGLVMATLQ
MLNMKYSHWLRFVWPVVVFVLVFGGALLVTEVLIN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAV1171 NP_371695.1 hypothetical protein Not tested vSa¥ã Protein 5e-178 73
SA1014 NP_374287.1 hypothetical protein Not tested vSa¥ã Protein 5e-178 73
SAKOR_01092 YP_008491280.1 Arginine/ornithine antiporter Not tested vSa¥ã Protein 2e-178 73
SACOL1183 YP_186046.1 hypothetical protein Not tested vSa¥ã Protein 2e-178 73
SAUSA300_1064 YP_493762.1 TRAP family protein Not tested vSa¥ã Protein 2e-178 73
MW1052 NP_645869.1 hypothetical protein Not tested vSa¥ã Protein 1e-178 73