Gene Information

Name : CbC4_0073 (CbC4_0073)
Accession : YP_004394753.1
Strain : Clostridium botulinum BKT015925
Genome accession: NC_015425
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1576
EC number : -
Position : 68498 - 68977 bp
Length : 480 bp
Strand : +
Note : -

DNA sequence :
ATGAATATAACTATTATTTGTGTTGGAAAACTAAAAGAAAAATACTTAAAGCAAGCTATTGATGAATATAGTAAAAGATT
ATCAAGGTATTGTAAGTTAAGTATAGTTGAGTTAAATGATGAAAAAACTCCTGATAATGCATCAGAGAAGGATGAAATTA
TAATAAAGCAAAAAGAGGGAATGAGAATTCTATCACATATAAAGGATAATATGTACGTAATCGCATTAGACATAAAGGGG
AAAATGGTAAGTTCTGAGGAGCTTGCTGACTTAGTTAATGATTTAGGACTTAGAGGCAATAGTAATATAGCTTTAGTTAT
AGGAGGTTCTTTAGGTTTAGATAAAGAGGTTTTGGATAGAGCTAATTATAAATTGTCATTTTCTAAGATGACATTTCCGC
ATCAATTAATGAGAGTAATATTATTGGAACAGATTTATAGAGCATATAGAATAAATAGCGGAGAACCGTACCATAAGTAA

Protein sequence :
MNITIICVGKLKEKYLKQAIDEYSKRLSRYCKLSIVELNDEKTPDNASEKDEIIIKQKEGMRILSHIKDNMYVIALDIKG
KMVSSEELADLVNDLGLRGNSNIALVIGGSLGLDKEVLDRANYKLSFSKMTFPHQLMRVILLEQIYRAYRINSGEPYHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 2e-45 60
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 3e-45 60
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 2e-45 60
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 2e-45 60
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 2e-45 60
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 2e-45 60
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 8e-45 60
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 2e-45 60
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 2e-45 60
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 2e-45 60
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 2e-45 60
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 2e-45 60
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 3e-45 60
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 4e-46 59
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 4e-44 59
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 4e-44 59
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 4e-44 59
unnamed ACL99851.1 hypothetical protein Not tested Type-V SCCmec Protein 3e-28 58
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 2e-41 57