Gene Information

Name : ribD (CbC4_2439)
Accession : YP_004397101.1
Strain : Clostridium botulinum BKT015925
Genome accession: NC_015425
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : -
Position : 2644575 - 2645693 bp
Length : 1119 bp
Strand : -
Note : -

DNA sequence :
GTGGATCTTAGATATATGAAAAGAGCTATAAATTTATCTAAGTTAGGTATTGGACATACTTACCCTAATCCTTTAGTAGG
AGCTGTTATTGTAAAGGATAACAAAATTATAGGTGAGGGATACCACCAATATTTTGGTGAAAATCATGCAGAAATTAATG
CTTTAAAAAATGTTAAAGAGGATGTAAATGGAGCTACTATGTATGTTACTTTGGAGCCATGTTCTCACTATGGTAAAACC
CCACCTTGTGCCAATGCCATTGTAAAAAGCGGAATAAAGAAAGTAATAATAGGAATGAGGGATCCCAATTCATTAGTTGC
TGGTAGAGGTATAAGAATACTAAAGAATAACGGAATAGAAGTAATTCAAGGAGTGCTTGAGGAAGAAATAAAAAAAGTAA
ATGAGATTTTTATAAAATATATTACAACTAAATTACCATTTTGTATTTTGAAAACTGCTATGACATTAGATGGAAAAATA
GCAACTAGGGATGGAGATTCAAAATGGATAAGTAATGAGATATCTAGGCAATATGTTCATGAGATACGACATAAAGTAGC
TGGAATTATGGTTGGAATAGGGACTATTCTTAAAGATAATCCTAGTTTGACTACTAGACTTAATAATAAAAAGGGAAGAG
ATAGCACAAGGATAATTATAGATAGCAAAGGAAGAATACCTGTTGAGTCAAAAGTATTAAATCTAGAGTCTGAAGCTAAT
ACCATAATAGTTACAACGGAATTAGCAAGCAGAGAAAAGATTGAAGTTATAAGAAGTAAAGGGGCAGAAGTAATAATAAC
ACCACTATGTGATGATAGGGTGGATTTAAAATATCTTATGAGAGAGTTAGGAGAAAGAAATATAGATAGTGTTTTACTAG
AAGGTGGTGCGGAACTTAACTATTCTGCGTTAAATGAAGGAATTGTAGATAAAGTAATATCTTTTATATCACCTAAGATA
ATAGGGGGAAAAGAGGCCAAAACACCTGTAGGTGGAGTTGGGAAAAGTGCTATAAGTGAATGTGTAAATCTTGAAAATAT
AAAAGTATCACAGTTTGAAGAAGATATTGTTATAGAAGGTTATATTAAAGGGGAGAAAAAGTTATGTTCACAGGAATAG

Protein sequence :
MDLRYMKRAINLSKLGIGHTYPNPLVGAVIVKDNKIIGEGYHQYFGENHAEINALKNVKEDVNGATMYVTLEPCSHYGKT
PPCANAIVKSGIKKVIIGMRDPNSLVAGRGIRILKNNGIEVIQGVLEEEIKKVNEIFIKYITTKLPFCILKTAMTLDGKI
ATRDGDSKWISNEISRQYVHEIRHKVAGIMVGIGTILKDNPSLTTRLNNKKGRDSTRIIIDSKGRIPVESKVLNLESEAN
TIIVTTELASREKIEVIRSKGAEVIITPLCDDRVDLKYLMRELGERNIDSVLLEGGAELNYSALNEGIVDKVISFISPKI
IGGKEAKTPVGGVGKSAISECVNLENIKVSQFEEDIVIEGYIKGEKKLCSQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 4e-48 41
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 4e-48 41