Gene Information

Name : CbC4_2242 (CbC4_2242)
Accession : YP_004396904.1
Strain : Clostridium botulinum BKT015925
Genome accession: NC_015425
Putative virulence/resistance : Unknown
Product : RNA binding S1 domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 2437995 - 2440163 bp
Length : 2169 bp
Strand : -
Note : -

DNA sequence :
ATGGAGGAAACTATGACGAATATTAATAATAAATTAGCCAAAGAATTTAATATACAATTAAAACAAGTGGACAGTGTTAT
TGAACTTTTAGATGGAGGTAACACTGTTCCTTTTATTGCTAGATATAGAAAAGAAAAAACTGGTGGACTTGATGATGTAG
TTTTAAGAAATCTTGCTGAAAGGCTTACATATTTAAGAAATTTAGAAGAAAGAAAATCAGATGTAATAAGAATAATTGGA
GAACAAGATAAACTTACAGAAGAGTTAAAGCTGAAAATTGAAATGTGTGAGACATTAACAGAAGTAGAAGATATATATAG
ACCATTTAAACCTAAGAAAAGAACTAGAGCCACTATAGCAATGGAAAAGGGGTTAAAACCCATTGCTGAAATAATCATTA
ATGGTAATTTTAAAGGTAATATAGAGGAATATGCAAGCAAATTTATAAATGAAGAAAAAGAAGTATCTTCCGAAATAGAA
GCTTTAAATGGAGCTAAAGATATAGTTGCCGAAGCTATTTCAGATGAAGCGGAGTATAGAAAGTGGATAAGAGAATTTGT
TAGAAAAAATGGGATGATTGAATGTACTGGAAGTAGTGAAGAACCAACTCCATATGAAATGTATTATGATTATTCTGAAG
CTATTTTAAAAATACCTTCTCATAGAATTTTAGCTATTAATAGAGGAGAAAAAGAAAAGGTTTTATCTGTAAAAGTAACA
TGTGATACTAATAAAATAATAGAGTATTTAAATAGAAAATGTAAAAAAGAAAATTCTATCACAGATAAATTTATAGAAGA
AAGTGTTGAAGATTCGTTGAAAAGACTTATTTATCCATCAATTGAAAGGGAAATAAGAGCAGAGCTTACTGACAAGGGGG
AAGAGGGTGCAATTGATGTTTTTAAAGCTAATTTAAGTGCCCTTTTAATGCAAGCGCCTATAAAAGGAAAAGTTGTTTTA
GGATATGACCCTGGATTTAGGACTGGATGTAAAATAGCTGTGCTGGATGATACAGGAAAACTTTTAGATACAGCAACAGT
ATATGCTACTGCACCACAAAATGATGTTGATGGATCAATCAAAATACTTAAAGAACTTGTTTATAAACATAATGTAGATG
TTGTTTCATTGGGAAATGGAACAGCTAGTAGAGAGTCGGAAGAAGTTTTAGCTAGACTTATAGAAGATGTTAAGAAAGAA
AGTGGAAAAGATTTATTTTATGTTGTAGTATCAGAGGCTGGGGCATCAGTTTATTCAGCATCAGAACTTGCAACAAAGGA
ATATCCAGATATAAATGTTTCTATAAGAGGTGCTATTTCAATAGGACGTAGACTTCAAGATCCTATGGCTGAACTTGTTA
AAATTGATCCTAAATCAATAGGAGTTGGGCAATATCAACATGATGTATCTTCAAAAAGACTTGATGAGTCATTAAGCGGT
GTTGTAGAGAATGTAGTAAATAGTGTTGGAGTAGATTTAAATATAGCAACGCCTTCGCTTTTATCATATATTTCAGGAAT
AAATTCAACTATTGCAAAAAACATAGTTGAATTTAGAGAAGAGAATGGCAAGTTTAACAATAGAAAAGAATTGTTAAAAG
TAAAAAGACTTGGACCGAAAGCTTTTGAACAATGTGCAGGATTTTTAAGAGTAACAGAAAGTAAAGAAGTTCTTGATAAT
ACTTCTGTTCATCCAGAATCATATAAGGCAACTAAAGAATTTTTAAAAATATTAGGTTATACAGAAGATAATATAATAAA
AGGAAATTTATTGGATTTGGATAGCAAAGTTAGAGAGCATAAAGTAGAAACTTTAGCTGAAAAATTAGGTATTGGAGTTC
CGACTCTTGAAGACATAATAAAAGAAATAAAAAAACCAGGACGTGATCCAAGAGAAGAACTTCCAAAACCGATATTTAAA
AAAGGAATAGTAGATATAAATCAGCTAAAACCAGATATGATGTTAACAGGAACAGTTAGAAATGTAGCAGATTTTGGAGC
GTTTGTAGATATAGGAGTTCATCAAGACGGACTAGTTCATATAAGTCAATTATCGGATAAGTTTGTAAAGAATCCTTTAG
ATATAGTTAAAGTTGGAGATGTGGTTGAAGTTAGGGTTTTAGAAGTAGATGAAAAGAGGGGGAGAATATCTCTTTCTATG
AAGAAGTAA

Protein sequence :
MEETMTNINNKLAKEFNIQLKQVDSVIELLDGGNTVPFIARYRKEKTGGLDDVVLRNLAERLTYLRNLEERKSDVIRIIG
EQDKLTEELKLKIEMCETLTEVEDIYRPFKPKKRTRATIAMEKGLKPIAEIIINGNFKGNIEEYASKFINEEKEVSSEIE
ALNGAKDIVAEAISDEAEYRKWIREFVRKNGMIECTGSSEEPTPYEMYYDYSEAILKIPSHRILAINRGEKEKVLSVKVT
CDTNKIIEYLNRKCKKENSITDKFIEESVEDSLKRLIYPSIEREIRAELTDKGEEGAIDVFKANLSALLMQAPIKGKVVL
GYDPGFRTGCKIAVLDDTGKLLDTATVYATAPQNDVDGSIKILKELVYKHNVDVVSLGNGTASRESEEVLARLIEDVKKE
SGKDLFYVVVSEAGASVYSASELATKEYPDINVSIRGAISIGRRLQDPMAELVKIDPKSIGVGQYQHDVSSKRLDESLSG
VVENVVNSVGVDLNIATPSLLSYISGINSTIAKNIVEFREENGKFNNRKELLKVKRLGPKAFEQCAGFLRVTESKEVLDN
TSVHPESYKATKEFLKILGYTEDNIIKGNLLDLDSKVREHKVETLAEKLGIGVPTLEDIIKEIKKPGRDPREELPKPIFK
KGIVDINQLKPDMMLTGTVRNVADFGAFVDIGVHQDGLVHISQLSDKFVKNPLDIVKVGDVVEVRVLEVDEKRGRISLSM
KK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 7e-139 47