Gene Information

Name : CbC4_0200 (CbC4_0200)
Accession : YP_004394877.1
Strain : Clostridium botulinum BKT015925
Genome accession: NC_015425
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 209667 - 212108 bp
Length : 2442 bp
Strand : +
Note : -

DNA sequence :
ATGATGTTTGGAAGATTTACAGAAAGAGCACAGAAAGTTTTATACTATGCTCAAGAAGCAGCGCAAATTTTTAAACACGG
GTATGTTGGTACAGAACATATTTTACTAGGAATTTTAAAAGAAGATGAGGGAATATCAAAGAAACTTCTTAATGAAATGA
ATGTAAATGAAGAGAGTGTCTCAAAACTTATTGAAGAATATGAAGGTACAGGTGATATAAATCTTAATAAAAATGAGATT
CCTTTAACACCAAGAACCAAAAGATTATTAGAACTTAGTTTGCTAGAATCTAGAAAAAATAATCATAATTATATTACTCC
AGAACATATATTATTAGCTATGATAAAAGAATCAGAGGGTGTGGCATATGCTATATTAAATAATCTAAATGTTAACTTTG
AAAAATTACAAAAAGAACTATTAAAAGATTCAAATCTAAGTAGTGGTAAAATGGTTTCAGAGAAGATGGAGAAAAATATT
AGTCATAATACTCCTACTCTTGATAAGTATGGTAGAGATTTAACTAATATGGCTATAGACGGCAAATTAGATCCTGTAAT
AGGAAGAGATTCAGAAACTGAAAGAGTTCTTGAGATATTATGTAGAAGAATAAAAAATAATCCTTGTTTAATAGGTGATC
CTGGAGTTGGTAAAACTGCTATTGCAGAAGGACTTGCACAAAGAATAGTAAGTGGAAATATTCCAGAGATATTAAAAGAT
AAGAGGGTTGTGACTTTAGATATATCTTCTATGGTAGCAGGTTCTAAGTATAGAGGAGAATTTGAAGATAGAGTTAAAAA
GGTTATGGATGAGATATATAAGGATGGAAATGTCATATTGTTTATTGATGAAATACACACAATTGTTGGAGCTGGTGGAG
CAGAAGGTGCAATAGATGCATCTAATATACTTAAACCAGCTCTTGCAAGAGGAGAACTTCAGTGTATAGGAGCCACAACT
ATAGATGAATATAGAAAATATATAGAAAAAGATTCAGCTCTTGAAAGAAGATTTCAACCTGTTAATGTTGGAGAGCCAAC
TAAAGAAGAGTCTATACAAATATTAAAAGGACTTCGTGATAAATATGAAGCACATCATGGAGTGAAAATAACAGATGAGG
CAATACAGGCAGCTGTTGAACTATCTGATAGATATATAACTGATAGATATCTTCCAGATAAAGCTATAGATTTAATAGAT
GAGGCTGGGGCTAAAGTAAGAATTAAAAATCTAACAGCACCACCAGATTTAAAAGGATTAGAAGAAGAACTTGAGAAGGT
TGGAAAAGAAAAAGAAGATGCTATTACAGTACAAGACTTTGAAAAGGCAGCTTCCTTAAGAGATACAGAAAAAGAATTAA
AAGATAAATTAAAAGATTTTAAAAATAATTGGAAAAAGAAAAGTCAGGTAGCCACTCAGATTGTTTCAAAGGAACAAATA
GCTCAAGTGGTTTCTACGTGGAGTAATGTTCCAATAGAGAAACTTACGGAAAAAGAAGCGGATAGATTATTGAAGTTAGA
AGAAATTCTTCATAAAAGAGTCATAGGACAAAATGAAGCTGTTAAATCAATAGCTAAAGCTGTAAGGCGAGCAAGGGTAG
GGCTTAAAGATCCTAAAAGACCAATAGGTTCTTTTATATTCTTAGGACCTACAGGGGTTGGAAAGACTGAATTATCAAAA
GCTCTTGCAGAGGCAATGTTTGGCGATGAAAATAACATGATAAGAGTTGATATGTCTGAATATATGGAAAAACATGCAGT
ATCAAGGCTTGTTGGTTCACCACCAGGATATGTAGGACATGATGAGGGAGGTCAATTAACTGAAAAAGTAAGACGTAATC
CATATTCAGTGGTACTTTTTGATGAAATTGAAAAAGCTCATCCTGAAGTATTTAATATACTTCTTCAAATATTAGAGGAT
GGAAGACTTACAGATTCTAAGGGGAAAACTGTAGATTTTAGAAATACAATAATAATATTGACATCAAATGTAGGAGCATC
AACAATTAATAAACAAAATACATTAGGTTTTTCTAATTCAGAGGATGAAGCAGAAGATGAGTACGAAAGAATGAAGGACA
ATGTTATGGTAGAATTAAAAAGAAGCTTTAGACCTGAATTTTTAAATAGAATAGATGATATTATAGTATTCCATACTTTA
AATCAAGAAGATTTAAAAGAAATAGTAAAACTTATGCTTGAAGAAGTTTCAGGTAGGTTAAAAAATAGAGAAGTATATAT
TGAATTTGATGAAAAAGCGGAAAAATTATTATCAAGTAAAGGTTTTGATAGTGCATATGGGGCAAGGCCATTAAGAAGAA
CTATAACTAAAACTGTAGAAGATAAATTATCTGAAGAAATATTAAAGGGTATTATAAAAAAAGGTGATCATGTAAAGGCT
ACAGTTAAAGATGATGAGTTAGTTTTTGAAATGAAAAATTAA

Protein sequence :
MMFGRFTERAQKVLYYAQEAAQIFKHGYVGTEHILLGILKEDEGISKKLLNEMNVNEESVSKLIEEYEGTGDINLNKNEI
PLTPRTKRLLELSLLESRKNNHNYITPEHILLAMIKESEGVAYAILNNLNVNFEKLQKELLKDSNLSSGKMVSEKMEKNI
SHNTPTLDKYGRDLTNMAIDGKLDPVIGRDSETERVLEILCRRIKNNPCLIGDPGVGKTAIAEGLAQRIVSGNIPEILKD
KRVVTLDISSMVAGSKYRGEFEDRVKKVMDEIYKDGNVILFIDEIHTIVGAGGAEGAIDASNILKPALARGELQCIGATT
IDEYRKYIEKDSALERRFQPVNVGEPTKEESIQILKGLRDKYEAHHGVKITDEAIQAAVELSDRYITDRYLPDKAIDLID
EAGAKVRIKNLTAPPDLKGLEEELEKVGKEKEDAITVQDFEKAASLRDTEKELKDKLKDFKNNWKKKSQVATQIVSKEQI
AQVVSTWSNVPIEKLTEKEADRLLKLEEILHKRVIGQNEAVKSIAKAVRRARVGLKDPKRPIGSFIFLGPTGVGKTELSK
ALAEAMFGDENNMIRVDMSEYMEKHAVSRLVGSPPGYVGHDEGGQLTEKVRRNPYSVVLFDEIEKAHPEVFNILLQILED
GRLTDSKGKTVDFRNTIIILTSNVGASTINKQNTLGFSNSEDEAEDEYERMKDNVMVELKRSFRPEFLNRIDDIIVFHTL
NQEDLKEIVKLMLEEVSGRLKNREVYIEFDEKAEKLLSSKGFDSAYGARPLRRTITKTVEDKLSEEILKGIIKKGDHVKA
TVKDDELVFEMKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CbC4_0200 YP_004394877.1 ATPase AAA-2 domain-containing protein VFG0079 Protein 0.0 60
CbC4_0200 YP_004394877.1 ATPase AAA-2 domain-containing protein VFG0080 Protein 3e-153 52