Gene Information

Name : CbC4_1964 (CbC4_1964)
Accession : YP_004396633.1
Strain : Clostridium botulinum BKT015925
Genome accession: NC_015425
Putative virulence/resistance : Virulence
Product : Negative regulator of genetic competence clpC/mecB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2103170 - 2105473 bp
Length : 2304 bp
Strand : -
Note : -

DNA sequence :
ATGGAAATGTGCTCCATTTGCAAGAAAAATATAGCAACTATATATACTGCAAAGACAGAAAATGGAAAAACAAAGATGGT
TGGTATTTGCTTAGAATGTGCAAAGAAAATGGGTATGCCTATAATGGATCAATTTATGAAGCAAGTAGGTATAACTGAAG
ATGATATGGATAACTTAACTGAACAAATGAACAATGTGCTTCAGGATTCTAATATTGAAGATTTAACAGATAATAATTTT
CTTATGAATGTTTTAAATGGGATATTTCCGGAAGACAAAAAAGAAGAAGATAAAGATAGTAATTTAGATTCACTTGAATT
TGATAAAGAAAAAATTCTAAATAAAAAGGATTCTTCTGAAAAATCCGATATAAAAACAAAAAAAGGTTTTTTAAATAAAA
AGAAAAATAAGTATCTAGATAAATATGGTATAAATCTTACTAATAAAGCTAAAGAAAATAAAATAGATAGAGTAATCGGA
AGAAATAGAGAAATTGATAGAGTTATACAAATTTTAAATAGAAGAAATAAAAATAATCCCATATTAATAGGTGAGCCAGG
TGTTGGTAAGACAGCTATTGCAGAAGGATTGGCTGTTAGAATTGCTGAAAAGAATGTTCCTGCAAAGTTATTTGATGTAG
AGGTATATCTTCTTGATCTTACAGCGGTTGTAGCAGGTACACAATTTCGAGGGCAATTTGAAGGTAGAATGAAATCAATT
ATTGATGAGGCTAAGAAAAATGGTAATGTTATATTAGTAATTGATGAGGTTCATAATATAATGGGGGCAGGAGAAGCACA
AGGTGGTTCTATGAATGCAGCTAATATTTTAAAGCCAGCCCTTGCAAGAGGAGAAATTCAAGTAATAGGTGCTACGACTT
TAGATGAGTATAGAAAATATATAGAGAAGGATTCTGCATTAGAAAGAAGATTTCAACCAGTACTAGTAGAAGAGCCTACA
GTAGAAGAAACAATAGAAATTTTAGAGGGAATAAAAAATTATTATGAAGAATATCATCAAGTAAAAATATCACATGATGT
AATTGAAGATGCGGTAAATTTATCACAAAGATATATTAATGATAGATTTTTACCAGATAAAGCTATAGATGTAATTGATG
AAGCTAGTTCTAGAGCCAACTTAAAGAATAAAGGATTGGTAGAGTTAAAATCAATAGAAGATGAATTGAAAAAAATACAA
GAAGAAAAACAAATAGCAGCTGAAGGGGATAATTATGAAAAAGCAGCTGAATATAAAGTAGAAGAATGCAGACTTAAAGA
AAAAATAAAAGAAATAAAAAAAGAATCTATGGATGTAGTATTAACAACGAAAGATATTGCATTTGTTATAGAAGCTTGGA
CCAAAATACCTGTTCAAAGAATTACAGAAGAAGAGGGAGAAAAACTTATAAACCTTGAAGATAGACTGCATAAAAGGGTT
ATAGGACAAAATGAAGGTGTAAAAAGTTTGGCTAAAGCTATACGTCGTAATAGATTAGGATTTACTAAAAAGAAAAAGCC
ATCTTCATTTATATTTGTTGGACCTACAGGTGTTGGGAAAACAGAGCTTGTAAAGGCGTTAGCAGGAGAACTATTTGGTA
ATGAAGATGCATTAATTAGGGTAGATATGTCTGAATATATGGAGAAGCACACAGTGTCTAAATTAATTGGAGCACCTCCA
GGATATGTAGGACACGATGATGGAGGACAATTAACAGAAAAGGTAAGAAGAAAACCTTACTCTGTAATATTATTAGATGA
AATTGAAAAAGCTCATCCAGATGTATTTAATATGTTACTTCAAATTCTTGAGGATGGAAGACTTACTGATAGTCAGGGAA
GAACTGTTTCTTTTGAGCATACTGTAATTATAATGACATCTAATGTAGGAACTAATTTTAAGGCTGATAGCATAGGATTT
AATCAAGAAGGATATGATGCTATGGAAAGTCGTGTTAAAGAAGCTTTGAAAGAAACATTTAGACCAGAATTTATAAATAG
AATAGATGAAATAATAGTATTTAATTCTTTAAATAAAGATGAATTATATAAAATAATTGACCTAATGTTTGAAGAAGTAA
AAGAAGAAGTAAAAGTAAGAAAAATAAATTTAGATATTGATGATAGTGTAAAAGACTTCATATTAAAAGTAGGATATGAT
GAAAAATATGGAGCAAGACCACTAAGAAGGGCTATTCAAAGGCATATTGAGGATGAAATAGCAGAGGCATATCTTCTTAA
AAAAATTAAAGAAGGTTCAAATATAAAAGTAAAAGCAGTTGATGGAAAGATTATTTTAGAATAG

Protein sequence :
MEMCSICKKNIATIYTAKTENGKTKMVGICLECAKKMGMPIMDQFMKQVGITEDDMDNLTEQMNNVLQDSNIEDLTDNNF
LMNVLNGIFPEDKKEEDKDSNLDSLEFDKEKILNKKDSSEKSDIKTKKGFLNKKKNKYLDKYGINLTNKAKENKIDRVIG
RNREIDRVIQILNRRNKNNPILIGEPGVGKTAIAEGLAVRIAEKNVPAKLFDVEVYLLDLTAVVAGTQFRGQFEGRMKSI
IDEAKKNGNVILVIDEVHNIMGAGEAQGGSMNAANILKPALARGEIQVIGATTLDEYRKYIEKDSALERRFQPVLVEEPT
VEETIEILEGIKNYYEEYHQVKISHDVIEDAVNLSQRYINDRFLPDKAIDVIDEASSRANLKNKGLVELKSIEDELKKIQ
EEKQIAAEGDNYEKAAEYKVEECRLKEKIKEIKKESMDVVLTTKDIAFVIEAWTKIPVQRITEEEGEKLINLEDRLHKRV
IGQNEGVKSLAKAIRRNRLGFTKKKKPSSFIFVGPTGVGKTELVKALAGELFGNEDALIRVDMSEYMEKHTVSKLIGAPP
GYVGHDDGGQLTEKVRRKPYSVILLDEIEKAHPDVFNMLLQILEDGRLTDSQGRTVSFEHTVIIMTSNVGTNFKADSIGF
NQEGYDAMESRVKEALKETFRPEFINRIDEIIVFNSLNKDELYKIIDLMFEEVKEEVKVRKINLDIDDSVKDFILKVGYD
EKYGARPLRRAIQRHIEDEIAEAYLLKKIKEGSNIKVKAVDGKIILE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 7e-151 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CbC4_1964 YP_004396633.1 Negative regulator of genetic competence clpC/mecB VFG0080 Protein 1e-153 57
CbC4_1964 YP_004396633.1 Negative regulator of genetic competence clpC/mecB VFG0079 Protein 7e-158 56