|
Name : lysS (CbC4_0170) Accession : YP_004394850.1 Strain : Clostridium botulinum BKT015925 Genome accession: NC_015425 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 174610 - 176142 bp Length : 1533 bp Strand : + Note : - DNA sequence : ATGGGAGAAAAGCAATTGACAAAGGAAGAAATAAAGCAAAGAAAGATGGAAGCGAAGAAAGAAGCTGAATTCAATGCTTT GGTAAAAGAAAGAATGCAAAAGCTTTCAAATCTTCAAGAACAAGGGAAAGACCCTTTTGATGTATATAAGGTAGAAAGAA CTCATACATCACAACAAATAAAAGATAACTATGATGAATTAGAGGGTAAAAACGTAACTGTTGCAGGTAGACTTATGTCT AAGAGAGTGCATGGTAAAGCAGGATTCTCTGATATTCGTGATAGATATGGAAAAATTCAATTATATATAAAAATTGATGA TGTTGGAGAAGAAAAGCTTAAAGAATATAAAACATTTGATATAGGTGATTTTGTATCTATAACAGGAACTGTATTTAAGA CAAAAACAGGAGAAGTAACTTTACATATTCTTGATTTTAAATTACTTACTAAGTCTTTAAAACCATTACCAGAGAAGTTC CACGGATTAAAGGATCCAGATTTAAGATATAGACAAAGATACGTAGATTTAATAATGAATGAAGATGTAAGAGAAACATT TATGAAAAGAACTGCTATAATAAAGGCTATTAGAGAATTCTTAGATAATAGAGAATTCTTAGAAGTTGAAACTCCAATTC TTTCTCCAATAGCTGGTGGTGCGGCTGCAAAGCCATTCATAACTCACCATAATGCATTAGATATAGATATGTATCTTAGA ATAGCAACAGAACTTTATCTAAAGAGACTTATTGTAGGTGGATTTGAGAAGGTATATGAAATAGGTAAAAACTTTAGAAA TGAAGGAATAGATATAAGACATAACCCTGAATTTACAGCTATAGAGTTATATGAAGCATATGCTGATTATAATGATATGA TGGAAATTACTGAAAACATGGTAGCTTACGTTTGCGAAAAAGTTAATGGAACTACTAAAGTTATGTATGAAGGTACAGAA ATAGATTTCAAACCACCTTGGAGAAGAATTACAATGGTTGATGCTGTAAAAGAATTTGCAGGTGTAGACTTTAATGAAGT TAATACTGATGAAGAAGCTAGAGAAATAGCTAAAGGAAAAGAATTAGAACTTAAAAAAGAGCTTAAAGATTGCACAAAAG GAGACATCTTAGTAGCTTTATTTGAGGAGTTCGGAGAAGAAAAATTAATGCAACCAACATTTGTATGTGACTATCCAAAG GAAAACTCACCTCTTACTAAAAAGAAAAGAGGAAATGATGCATTAACTGAAAGATTTGAAGGATTCGTATACGGAAGAGA AATATGTAATGCATATTCTGAATTAAATGATCCTATAGTTCAAAAAGAAAGATTTGTACAACAACTTAAAGAAAGAGAAC TTGGTGATGATGAAGCATATATGATGGATGATGATTTCATAAATGCTTTAGAAATCGGTATGCCACCTACAGGTGGACTT GGAATAGGTATAGATAGATTAATAATGTTCTTAACTGATTCTAGTTCAATTAGAGACGTTATATTATTCCCAACAATGAA ACCAACAAAATAG Protein sequence : MGEKQLTKEEIKQRKMEAKKEAEFNALVKERMQKLSNLQEQGKDPFDVYKVERTHTSQQIKDNYDELEGKNVTVAGRLMS KRVHGKAGFSDIRDRYGKIQLYIKIDDVGEEKLKEYKTFDIGDFVSITGTVFKTKTGEVTLHILDFKLLTKSLKPLPEKF HGLKDPDLRYRQRYVDLIMNEDVRETFMKRTAIIKAIREFLDNREFLEVETPILSPIAGGAAAKPFITHHNALDIDMYLR IATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNPEFTAIELYEAYADYNDMMEITENMVAYVCEKVNGTTKVMYEGTE IDFKPPWRRITMVDAVKEFAGVDFNEVNTDEEAREIAKGKELELKKELKDCTKGDILVALFEEFGEEKLMQPTFVCDYPK ENSPLTKKKRGNDALTERFEGFVYGREICNAYSELNDPIVQKERFVQQLKERELGDDEAYMMDDDFINALEIGMPPTGGL GIGIDRLIMFLTDSSSIRDVILFPTMKPTK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 6e-106 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004394850.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 3e-106 | 47 |
