Gene Information

Name : CbC4_1521 (CbC4_1521)
Accession : YP_004396197.1
Strain : Clostridium botulinum BKT015925
Genome accession: NC_015425
Putative virulence/resistance : Resistance
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1614381 - 1615055 bp
Length : 675 bp
Strand : -
Note : -

DNA sequence :
GTGGAAGATGAAGAACACATAAGAGAGCTTATAAAATTCAATCTTGAAAATAATAATTACAAGATTATTTTTGCATCTAA
TGGTATAGATGCTGTTGAGATTGCAAAAAAAGAATTGCCGGATTTAATTTTATTAGATATTATGCTTCCCGGAAAAGATG
GATATGATGTGTGTAAAGAAATAAGAAATAATAATGATACTTATAATATTTCAATAATAATGATAACTGCTAAAAGTGAA
GAGATAGATAAAATATTGGGTTTGGAATTAGGTGCTGATGATTATATAACAAAACCTTTTTCAATAAGAGAATTGATTGC
AAGAGTGAAAGCTGTACTTAGAAGAACTACATTGTTGCAAAATAATAGTAGAATGTATAAATTTGAAAATATAATGGTGG
ATTTTGACCAACATAAATTATTTAAAGATAATAAAAAAGTAGATTTAACATTAAAGGAATTTGAACTTATAGAGATTTTA
GTGAAAAATAAAGGTAAGATTATGACTAGAGAATATCTTTTAGACAAAGTTTGGGGTTATGAATATGTGGGGGAAACCAG
AACTATAGATGTTCATATACGTCATCTTAGAAAAAAGATAGAGCTTGATGACAAAAGGCCTAAGTTTATTGAAACTATAA
GAGGTGTAGGATATAGGTTTAACTGTTATGAGTGA

Protein sequence :
MEDEEHIRELIKFNLENNNYKIIFASNGIDAVEIAKKELPDLILLDIMLPGKDGYDVCKEIRNNNDTYNISIIMITAKSE
EIDKILGLELGADDYITKPFSIRELIARVKAVLRRTTLLQNNSRMYKFENIMVDFDQHKLFKDNKKVDLTLKEFELIEIL
VKNKGKIMTREYLLDKVWGYEYVGETRTIDVHIRHLRKKIELDDKRPKFIETIRGVGYRFNCYE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_001698483.1 regulatory protein Not tested Not named Protein 8e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator NC_012469.1.7686381. Protein 6e-40 48
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator HE999704.1.gene2815. Protein 2e-41 48
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator NC_002952.2859905.p0 Protein 6e-43 47
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator NC_009641.5332272.p0 Protein 7e-43 47
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator NC_013450.8614421.p0 Protein 7e-43 47
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator NC_007793.3914279.p0 Protein 7e-43 47
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator NC_002745.1124361.p0 Protein 7e-43 47
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator NC_009782.5559369.p0 Protein 7e-43 47
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator NC_002951.3237708.p0 Protein 7e-43 47
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator NC_003923.1003749.p0 Protein 7e-43 47
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator NC_002758.1121668.p0 Protein 7e-43 47
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator NC_007622.3794472.p0 Protein 6e-43 47
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator NC_012469.1.7685629. Protein 1e-36 45
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator AE016830.1.gene1681. Protein 3e-39 44
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator BAC0039 Protein 3e-26 43
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator BAC0596 Protein 9e-26 43
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator CP000034.1.gene2186. Protein 3e-26 43
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator NC_002695.1.916589.p Protein 3e-26 43
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator CP001138.1.gene2239. Protein 9e-26 43
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator CP001918.1.gene3444. Protein 5e-26 43
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator NC_002758.1121390.p0 Protein 1e-28 42
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator AE015929.1.gene1106. Protein 4e-26 42
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator NC_010079.5776364.p0 Protein 1e-28 42
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator NC_002952.2859858.p0 Protein 1e-28 42
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator NC_007622.3794948.p0 Protein 1e-28 42
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator NC_003923.1003417.p0 Protein 1e-28 42
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator NC_013450.8614146.p0 Protein 1e-28 42
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator NC_002951.3238224.p0 Protein 1e-28 42
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator NC_007793.3914065.p0 Protein 1e-28 42
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator NC_014475.1.orf0.gen Protein 5e-32 42
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator NC_005054.2598277.p0 Protein 5e-32 42
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator CP004022.1.gene1676. Protein 1e-27 42
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator HE999704.1.gene1528. Protein 5e-26 41
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator CP000647.1.gene2531. Protein 2e-26 41
CbC4_1521 YP_004396197.1 winged helix family two component transcriptional regulator NC_010400.5986590.p0 Protein 9e-27 41