Gene Information

Name : CbC4_1277 (CbC4_1277)
Accession : YP_004395954.1
Strain : Clostridium botulinum BKT015925
Genome accession: NC_015425
Putative virulence/resistance : Unknown
Product : IstB domain-containing protein ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 1365679 - 1366431 bp
Length : 753 bp
Strand : -
Note : -

DNA sequence :
ATGAATAGTGCATATACACAACTTATAAAAAATCTAGAGTATTTAAAATTTAAACAAATGATTAATCATTTAGACGAAGT
CATTGATTTTTCTACTAAAAATAATTTATCCTTTGTTGATGCTCTTATTAAGCTTACAGCTTATGAAATAGATTTTAAAG
AAGCAAATATGATTAAATCTATGGTAAAAGTAGGCGCTTTTCCTCATAAAAAAGAGGTTAAAGACTTTGATTTCAGCTTT
CAACCTAGCATTAATAAAGATCAGATATTAGATTTTTTAACATTACGCTTTCTAAATACACAAGAAAATATAGTTTTCCT
AGGTCCTAGTGGAGTAGGAAAAACGCACCTTGCTACATCTATAGGAATTGCGGCAGCAAAACGTAGATATAGTACATACT
TTATTAAATGTCATGATTTATTACAGCAATTAAAACGTGCAAATTTAGAGAATCGATTAGATTCTAGACTTAAACATTTT
AGTAAGTACAAGCTCCTAATAATAGATGAATTAGGCTATCTACCGATAAATAAAGAAGACTCTAAGTTATTCTTCCAACT
CATTGACATGCGATATGAGAAAAAAAGTACAATTTTAACAACTAATATAAATTTCAATGCTTGGGATGATATTTTTTATG
ATCCTATCATCGCAAATGCTATATTAGATAGAGTTTTGCACCATGCTCATGTTATACCTATTAATGGAAAGTCTTATCGC
TTAAAAGATCACTTTAAAGATGACGATGAGTAA

Protein sequence :
MNSAYTQLIKNLEYLKFKQMINHLDEVIDFSTKNNLSFVDALIKLTAYEIDFKEANMIKSMVKVGAFPHKKEVKDFDFSF
QPSINKDQILDFLTLRFLNTQENIVFLGPSGVGKTHLATSIGIAAAKRRYSTYFIKCHDLLQQLKRANLENRLDSRLKHF
SKYKLLIIDELGYLPINKEDSKLFFQLIDMRYEKKSTILTTNINFNAWDDIFYDPIIANAILDRVLHHAHVIPINGKSYR
LKDHFKDDDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 2e-38 46
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 2e-35 45
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 1e-37 45
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 1e-37 45
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 1e-37 45
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 1e-37 45
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 1e-37 45
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 1e-37 45
api84 CAF28558.1 putative transposase Not tested YAPI Protein 1e-37 45
unnamed CAA21402.1 - Not tested HPI Protein 1e-37 45
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 1e-37 45
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 1e-37 45
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 9e-38 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CbC4_1277 YP_004395954.1 IstB domain-containing protein ATP-binding protein VFG1663 Protein 1e-38 46
CbC4_1277 YP_004395954.1 IstB domain-containing protein ATP-binding protein VFG1460 Protein 9e-36 45
CbC4_1277 YP_004395954.1 IstB domain-containing protein ATP-binding protein VFG1515 Protein 6e-38 45
CbC4_1277 YP_004395954.1 IstB domain-containing protein ATP-binding protein VFG1627 Protein 6e-38 45
CbC4_1277 YP_004395954.1 IstB domain-containing protein ATP-binding protein VFG1606 Protein 6e-38 45