Gene Information

Name : fliP (CbC4_1143)
Accession : YP_004395820.1
Strain : Clostridium botulinum BKT015925
Genome accession: NC_015425
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 1254711 - 1255484 bp
Length : 774 bp
Strand : +
Note : -

DNA sequence :
ATGAAGAAAAGGAAGTTTAGTTTATTTATTTTAATTGTATTTGCTCTTGTGATTTTAGGAGCTACAAAAGCATATGCTGC
TCCAGATACAATACCTGTACCTAAAGTTAATATTTCCGTAGATAAAGCTACAAATCCTAAAGATTATGTAGATAATATAA
AATTACTTGTTATGTTAACTGTACTTTCTCTGCTCCCATCGTTTCTAGTCATGATGACTAGTTTTACTAGAATAATTATA
GTTTTAGGTTTTATGAGAAATGCACTAGGAACTCAACAGGCGCCACCTAATCAAATTTTAATAGGAATAGCATTATTCCT
AACAATTTTTATAATGGCGCCTACATATAAAACCATCAATAAAGAAGCTATAAAACCATTTCTAGAAAATAAGATAACAG
GTCAGCAAGCTATGGATAATGCTTCGAAGCCTATGCGAGAGTTTATGTTAAAGCAAACTAGAGATAAAGATTTAGAATTA
TTTTTAGATGTTTCAAAAACAGATAAAACAAAAATAACAAAAGATAATGTTCCTATGTATGTTGTTATTCCATCATTCAT
AATTAGTGAACTTAAAACAGCTTTTAAAATAGGATTCTTACTTTATATACCATTCTTGATAATTGATATTGTTGTGGCAA
GTGTTCTTATGTCTATGGGAATGTTTATGTTGCCTCCGGTTATGATTTCACTACCATTTAAAATTTTATTATTTGTTATG
GTAGATGGATGGTATTTACTGGTCAAGTCCTTAATAATGGGATATTCGTCGTGA

Protein sequence :
MKKRKFSLFILIVFALVILGATKAYAAPDTIPVPKVNISVDKATNPKDYVDNIKLLVMLTVLSLLPSFLVMMTSFTRIII
VLGFMRNALGTQQAPPNQILIGIALFLTIFIMAPTYKTINKEAIKPFLENKITGQQAMDNASKPMREFMLKQTRDKDLEL
FLDVSKTDKTKITKDNVPMYVVIPSFIISELKTAFKIGFLLYIPFLIIDIVVASVLMSMGMFMLPPVMISLPFKILLFVM
VDGWYLLVKSLIMGYSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 4e-30 43
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 4e-30 43
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 4e-30 43
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 3e-33 42
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 3e-33 42
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 2e-30 41
unnamed AAL06354.1 EscR Virulence LEE Protein 5e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_004395820.1 flagellar biosynthetic protein FliP VFG2338 Protein 3e-50 56
fliP YP_004395820.1 flagellar biosynthetic protein FliP VFG2494 Protein 2e-50 53
fliP YP_004395820.1 flagellar biosynthetic protein FliP VFG2016 Protein 2e-52 51
fliP YP_004395820.1 flagellar biosynthetic protein FliP VFG1259 Protein 6e-56 48