Gene Information

Name : CbC4_0991 (CbC4_0991)
Accession : YP_004395668.1
Strain : Clostridium botulinum BKT015925
Genome accession: NC_015425
Putative virulence/resistance : Virulence
Product : exopolysaccharide biosynthesis protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1086
EC number : -
Position : 1102276 - 1104042 bp
Length : 1767 bp
Strand : +
Note : -

DNA sequence :
TTGAGATTTGAATTTAAAATACCTCAGGAGTATATAGGTTTTTTTAAAGTATCTATAGTTCCTGTTATCGTTATTACGAT
AATTTGTAATGGAGTATTTCACTTATATGATTATATATGGAAATATGCATCAGTTGATGAACTTATGTCAATAGTGTATT
CTGTATCGCTTTCAAATATAATATTTATATTTTATAGCTATTTTATAAGTTACAAATTATTGAGCTCTGTACATTATAGA
TTTCCAGCTACTGTACATATAATTTTATGGGTTTTATCTATATTAGCTTTAGGTGGAACTAGGTTTATGTATAGAATAGT
TGGAAGAAATGAAAACACAGAGTTACTTAATAATAAGGTTTCAAATGTATTGATAATTGGAGCTGGAGATGCTGGTGCAA
TGTTGATAAAAGAAATTAAAAAGCATCAATCTTTGAATTATAATATAGTTGGACTTATAGATGATGATTTATCAAAAATA
GGTCAAGTAATAAATGGTATAAAAATATTAGGAACAAGAGAAGAAATAACAAGAATATGTGAAAATAACAATGTTGAAGA
GATATTTATAGCTCTTCCATCAGCCCCATTAAAAGAAAGAAAAGAAATTTATAATTCATGTAAAAAAACAGGGTGCAAAT
TAAAAACGTTACCTGGTATATATGAAATAATTAATGGAGCTGTTAATATAAGTCAATTGAGAGATGTAGATATTAATGAT
TTATTAGGAAGAGATCCTATACAGCTTAATAATGAAAATATAAATGAATACATAAATGGAAAAGTTGTATTAGTTACAGG
GGGAGGAGGCTCTATAGGCTCAGAACTTTGTAGACAAATAGTTAAGTTTAATCCTAAGAAATTAGTAATCTTAGATATAT
ATGAAAATAATGCATATGATCTTCAGATGGAATTAAGGTATAAATATCCTGAACTTGATATGGATGTTATAATTGCGTCA
ATAAGAGATTTTAAAAGATTACAAGAGGTTTTTGAAAAGTATAAACCTTATGTAGTGTTCCATGCTGCTGCACACAAACA
TGTTCCTTTAATGGAATCAAATCCAGCAGAAGCAATAAAAAACAATATATTTGGAACTTACAATGTAGTAAAATGTAGTC
ATATTTATAAAGTTAAGAGATTTGTTCAGATAAGTACAGATAAAGCAGTAAATCCTACTAATGTTATGGGAGCTACAAAA
AGGTTTTGTGAAAAAATCATTCAAGCTTTTGCGAAAGAAAGTGAAACTGAATATGTGGCAGTTAGATTCGGAAATGTTCT
TGGAAGTAATGGTTCCGTAATACCTCTATTTAAAAGACAAATAAAAGAAGGTGGACCCGTAACAGTTACTCATCCTGAGA
TTAATAGATTTTTTATGACTATACCAGAAGCTGCGCAGCTTGTAATTCAAGCAGGTGCTATGGCAAGAGGTGGAGAAATA
TTTGTTCTTGATATGGGTGAACCAGTTAAAATAGTAGACTTAGCTAGAGACCTAATTAGACTATCAGGTTTAAAACCAGG
CGAAGATATAAAAATTGAGTATACAGGACTAAGACCTGGGGAAAAACTATATGAAGAGCTTTTAATGGATGAGGTTGCAT
TAACATCTACAGAACATGAAAAAATATTTGTTGAAAAACCTATGGGATTTAATATAAGTTATATAGATGAAGCACTAAAA
GATTTTAAAGAAGTTATTGAAGGTGACAAAGAAGGAATAATTAAAGTACTTTCAGATAAGGTTCCAACTTATACAAGAAA
AAAATAA

Protein sequence :
MRFEFKIPQEYIGFFKVSIVPVIVITIICNGVFHLYDYIWKYASVDELMSIVYSVSLSNIIFIFYSYFISYKLLSSVHYR
FPATVHIILWVLSILALGGTRFMYRIVGRNENTELLNNKVSNVLIIGAGDAGAMLIKEIKKHQSLNYNIVGLIDDDLSKI
GQVINGIKILGTREEITRICENNNVEEIFIALPSAPLKERKEIYNSCKKTGCKLKTLPGIYEIINGAVNISQLRDVDIND
LLGRDPIQLNNENINEYINGKVVLVTGGGGSIGSELCRQIVKFNPKKLVILDIYENNAYDLQMELRYKYPELDMDVIIAS
IRDFKRLQEVFEKYKPYVVFHAAAHKHVPLMESNPAEAIKNNIFGTYNVVKCSHIYKVKRFVQISTDKAVNPTNVMGATK
RFCEKIIQAFAKESETEYVAVRFGNVLGSNGSVIPLFKRQIKEGGPVTVTHPEINRFFMTIPEAAQLVIQAGAMARGGEI
FVLDMGEPVKIVDLARDLIRLSGLKPGEDIKIEYTGLRPGEKLYEELLMDEVALTSTEHEKIFVEKPMGFNISYIDEALK
DFKEVIEGDKEGIIKVLSDKVPTYTRKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-101 47
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 6e-98 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CbC4_0991 YP_004395668.1 exopolysaccharide biosynthesis protein VFG1300 Protein 2e-103 47
CbC4_0991 YP_004395668.1 exopolysaccharide biosynthesis protein VFG0029 Protein 4e-83 44