Gene Information

Name : B565_0478 (B565_0478)
Accession : YP_004391130.1
Strain : Aeromonas veronii B565
Genome accession: NC_015424
Putative virulence/resistance : Virulence
Product : Fimbrial chaperone protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 534384 - 535115 bp
Length : 732 bp
Strand : +
Note : -

DNA sequence :
ATGAAAAAGCTGCTCTCTTATATCTGTCTGGCTGCGCTTGGCATGACCTCACTCAACGTCAGTGCCGCCATTGTGCTGGA
TCGTACTCGTGCCGTTTATCCGGGCGGCGCCAAGTCCATCAGCCTCAACATCAAGAACGAGAACCAGAAGCTGCCTTACC
TGGCGCAGGCCTGGATTGAAGATGCCCAAGGCCAGAAGATCTCTTCTCCCTTCGTGGTGCTGCCGCCGGTACAGCGTGTG
GATGCCAACCAGAAGTCCATCGTGCGCATCGCCAGTGTGCCGGCCATCGAAAGCTTGCCCAAGGATCGTGAGTCCATCTA
CTACTTCAACCTGCGCGAGATCCCGCCCAAGAGCGAGAAGAGCAACGTGATGCAGATTGCCGTGCAGTCCAAGATCAAGC
TGTTCTACCGCCCCGAGGCCATTCTGCCCGAGCGTGGGGCAGTCTGGCAGGATCAGGTGCTGATCACCAAGCAGGGCAAA
GCCCTCAAGGTCAACAACCCGACCCCTTACTACATCACCTACGTGGGCCTAGGTCATCCGCAGGGCAAGGAGCGGACCAC
TATCAAGGGTTTCTCCGCCTTTATGGTTTCTCCCAAGTCAGAGCTGACGGTCACTATCCCGGAAACCCTGGGCAACGAAT
TTGTGATCAGCTATGTCAATGACTACGGCGGATATATGGATATCAAATACCAGTGCGCAGGCAATGCCTGTAAAGCCGTG
AAGAGCGAGTAA

Protein sequence :
MKKLLSYICLAALGMTSLNVSAAIVLDRTRAVYPGGAKSISLNIKNENQKLPYLAQAWIEDAQGQKISSPFVVLPPVQRV
DANQKSIVRIASVPAIESLPKDRESIYYFNLREIPPKSEKSNVMQIAVQSKIKLFYRPEAILPERGAVWQDQVLITKQGK
ALKVNNPTPYYITYVGLGHPQGKERTTIKGFSAFMVSPKSELTVTIPETLGNEFVISYVNDYGGYMDIKYQCAGNACKAV
KSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prfD CAD42028.1 PrfD protein Virulence PAI II 536 Protein 1e-52 51
papD AAL67413.1 PapD Virulence PAI II CFT073 Protein 2e-52 51
papD AAZ04423.1 P pilus chaperone Virulence PAI I APEC-O1 Protein 1e-52 51
papD_2 NP_757033.1 PapD protein Virulence PAI II CFT073 Protein 2e-52 51
papD YP_002414014.1 Chaperone protein PapD Not tested Not named Protein 2e-52 51
papD YP_854253.1 pilus assembly protein chaperone PapD Virulence PAI I APEC-O1 Protein 2e-52 51
papD NP_755464.1 PapD protein Virulence PAI I CFT073 Protein 3e-46 50
pixD CAE85158.1 PixD protein Not tested PAI V 536 Protein 4e-56 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B565_0478 YP_004391130.1 Fimbrial chaperone protein VFG1547 Protein 7e-53 51
B565_0478 YP_004391130.1 Fimbrial chaperone protein VFG0896 Protein 9e-53 51
B565_0478 YP_004391130.1 Fimbrial chaperone protein VFG0885 Protein 1e-46 50