Gene Information

Name : B565_3744 (B565_3744)
Accession : YP_004394396.1
Strain : Aeromonas veronii B565
Genome accession: NC_015424
Putative virulence/resistance : Unknown
Product : DNA topoisomerase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0550
EC number : -
Position : 4212150 - 4214123 bp
Length : 1974 bp
Strand : -
Note : -

DNA sequence :
ATGCGACTCTTTATCGCCGAGAAGCCCACGCTGGGCCGCGCCATTGCCGATGCCCTGCCCAAGCCCCACAAGAAGGGCGA
CGGTTTTATCGAAACAGCCCAGGGGGATGTGGTCACCTGGTGCATCGGCCATCTGCTGGAGCAGGCCGAGCCCGATGCCT
ATGACGCCGCCTTCAAGCAGTGGCGGATGGAGCATCTCCCCATCATCCCCGCCCAGTGGCAGCTGGTGGCCAAGCCCAAG
ACCAAAACCCAGCTCACCGTCATCAAGCGGCTGATCAAACAGGCGGACTGCGTGGTCAACGCCGGTGACCCGGATAGGGA
AGGGCAACTGCTGGTGGACGAGGTGATCGACTTTCTCGGCTACCCGAAAACCAAGCCGGTGCAGCGCTGCCTCATCAGCG
ATCTCAACCCACCCGCGGTGCGCCGCGCCCTCGACAAACTGAGGGATAACAAGGAGTTCGTGCCGCTGGCGGTCTCGGCG
CTGGCCCGCAGTCGGGCCGACTGGCTCTACGGCATCAACATGACCCGCGCCTACACCCTGCTCGGGCGCAAGGCCGGTTG
CAGCGAGCTGCTCTCGGTTGGTCGGGTGCAGACCCCGCTGCTCGGGCTGGTGGTGCGGCGGGATCTCGAGATCGAGGCCT
TCGTGCCCAAACCCTTCTACGAGGTGCTGGCCCATCTGCTGACCGAGGGCAACGAGCGCTTCACCGCCAAGTGGCTGCCG
TCCGAAGCCTGTCTACCGTGGCAAGATGAGGAGGGGCGGGTGCTCAACCGGGCGCTGGCCGACAAGGTGGTGAGCCGGAT
CAACGGCCAGCCTGCGCAAGTCGAATCGGTGGAGGAGCAGGCCCGCAAGCAGGCGGCGCCGCTGCCTTACAACCTCTCCA
GCCTGCAGATCGATGCCGCCAAGCGGTTCGGCATGGATGCCAAGCGGGTGCTCGACATCTGCCAAAGCCTCTACGAGCGT
CACAAGCTCATCACCTATCCGCGCTCCGACAGCCGCTATCTGCCGACCGACCATTTCAAGCGGGCCGAGCAGGTGCGCGG
TGCCATCGCCGCCACAGCGCCTGCGCTGGCCAAGGCGGTGAGCGAGGCAGACGGCAAGATCCGCAGCAAGGCGTGGAACG
ACAGCAAGGTGGATGCCCACCACGCCATCATCCCCACCGAGAAGCAGGGCAACCCCGCCACGCTGGGGGCCGACGAGGCG
AAGCTCTATGGCCTGATTGCCCGCCAGTATCTGCTGCAGTTCTATCCCCCGTTCGAATACAACGACAGCAAGGTGCTGCT
GCGCATCGCCGGTGGTCTGTTTCAGGCCAAGGCGCGGCGCATTCTCAAAGCGGGCTGGAAGGCACTGCTCGGGGTAGAAG
AGGATGACGACGAAGAGAAAGCGGGCACGCTGCCTGCCCTGAAAGAGGGAGAGCAACTGCTGTGCGAGCGGGGCGAACTG
CAGGAGAAAATGACCCAGCCGCCCAAGTCGTTCACCGATGCCACCCTGCTGGCGGCCATGACCGGCATCGCCCGCTATGT
GCAGGATCCCGAGATCCGCAAGACCCTGCGCGACACCGATGGCCTCGGCACCGAAGCGACCCGAGCAGGCATTATCGACC
TGCTGTTCAAGCGCCGCTTTCTGGTGCGTCAGGGCAAGAGCATCAAGGCGACCCCGACCGGACGGGCGCTGGTTCAGGCG
TTGCCCGCGACAGCTACCACGCCGGATATGACGGCGCTGTGGGAGCAGAGCCTCGGCCAGATCGCCGAGCGTCACGGTAG
CTACCAGCAGTTTATGGGGCCGCTCACCGAGCAGCTCAACGGCCTGATCGAGGGGGCGCGGCAGGACTCCGGCGCCAGCT
TCAGCGCCCTGCCCAAGGAGGCGCCGGGTGCCGGTAAGCGGCGTTTTACCAAACGCAAGAGTCCGGCGGCCAGCACGACT
GGCGGGCCCCGACCGCGCAAGACGGCCAGCAAGCGCCAGACCAGGGCGGCATAA

Protein sequence :
MRLFIAEKPTLGRAIADALPKPHKKGDGFIETAQGDVVTWCIGHLLEQAEPDAYDAAFKQWRMEHLPIIPAQWQLVAKPK
TKTQLTVIKRLIKQADCVVNAGDPDREGQLLVDEVIDFLGYPKTKPVQRCLISDLNPPAVRRALDKLRDNKEFVPLAVSA
LARSRADWLYGINMTRAYTLLGRKAGCSELLSVGRVQTPLLGLVVRRDLEIEAFVPKPFYEVLAHLLTEGNERFTAKWLP
SEACLPWQDEEGRVLNRALADKVVSRINGQPAQVESVEEQARKQAAPLPYNLSSLQIDAAKRFGMDAKRVLDICQSLYER
HKLITYPRSDSRYLPTDHFKRAEQVRGAIAATAPALAKAVSEADGKIRSKAWNDSKVDAHHAIIPTEKQGNPATLGADEA
KLYGLIARQYLLQFYPPFEYNDSKVLLRIAGGLFQAKARRILKAGWKALLGVEEDDDEEKAGTLPALKEGEQLLCERGEL
QEKMTQPPKSFTDATLLAAMTGIARYVQDPEIRKTLRDTDGLGTEATRAGIIDLLFKRRFLVRQGKSIKATPTGRALVQA
LPATATTPDMTALWEQSLGQIAERHGSYQQFMGPLTEQLNGLIEGARQDSGASFSALPKEAPGAGKRRFTKRKSPAASTT
GGPRPRKTASKRQTRAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
topB AAF14809.1 topoisomerase B Not tested SPI-7 Protein 2e-118 44
topB NP_458624.1 topoisomerase B Not tested SPI-7 Protein 2e-118 44
topB NP_807836.1 DNA topoisomerase III Not tested SPI-7 Protein 2e-118 44
pph56 CAI36097.1 Topoisomerase IA Not tested PPHGI-1 Protein 4e-111 43
PMI2630 YP_002152332.1 DNA topoisomerase III Not tested Not named Protein 1e-100 43
topB1 YP_005176228.1 DNA topoisomerase III Not tested ICEPmu1 Protein 8e-110 42
topB AAN62317.1 putative DNA topoisomerase III Not tested PAGI-3(SG) Protein 4e-111 41
topB AAN62194.1 putative DNA topoisomerase III Not tested PAGI-2(C) Protein 7e-112 41