Gene Information

Name : B565_2205 (B565_2205)
Accession : YP_004392857.1
Strain : Aeromonas veronii B565
Genome accession: NC_015424
Putative virulence/resistance : Unknown
Product : insertion element IS2 transposase InsD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2478483 - 2479361 bp
Length : 879 bp
Strand : -
Note : -

DNA sequence :
ATGGATTGCGCATGCGCCCTTGTTGCCGGGGGACGACGATTAAGTGCTGTGAGCCAGGCCCTTAATGTATCGCGTGCGCA
GCTATCCGTTCGTGTTCATCGAAAACCAGGTTGGCAAGATGGTCGTCATCATCGCCTGTATGCTGATGCTGCCTTACTTG
GCCGGATCATGGAGGCGATGGCTGAGCTTCCCTCCTATGGCTATCGTCGAGTCTGGGCGCTGTTACGGCGTCAGTCAGAG
GCAACACGACAGCCTGTGGTAAACGCCAAACGGGTATATCGCGTCATGCGCGATCATGGACTGCTGCTGGAAAGAAAACC
GGCTGCACCATTGACCCAGCGGGCACATAAGGGGCGTGTTGCCGTCAAGGAGAGCAATCGACGTTGGTGCTCAGATGGCT
TCGAGTTTCGCTGCGATAACGGTGAAAAACTACGAGTCACGTTTGCCATGGACTGCAGTGACAGGGAAACCTTGGACTGG
GCTGCCAGTACCGGGAGTTACGACAGAGCCACGGTGCAAGATGTCATGCTGAGGTCTGTTGAGCGTCGCTTCGGGGATGC
GTTGCCGGCATCACCGGTGGAGTGGCTGACTGATAATGGCTCGGCGTATCGAGCTCATGAGACCCGCGCGTTTGCACGAG
AGCTCTGGTTGGAGCCCAGAACGACTGCGGTGAGAAGCCCACAGAGCAACGGTATAGCGGAGAGCTTCGTGAAGACGATG
AAGCGAGACTATATCGAGATGATGCCAAAACCGGATAGCCGAACAGCGGTAGGCAATTTTGCTATCGCGTTTGAGTATTA
TAACGAGCACCACCCGCACAGCGCCTTGGGATACCATTCACCCCGGGAATATCTGCGCAGTCGGGTATCACAACCCTAA

Protein sequence :
MDCACALVAGGRRLSAVSQALNVSRAQLSVRVHRKPGWQDGRHHRLYADAALLGRIMEAMAELPSYGYRRVWALLRRQSE
ATRQPVVNAKRVYRVMRDHGLLLERKPAAPLTQRAHKGRVAVKESNRRWCSDGFEFRCDNGEKLRVTFAMDCSDRETLDW
AASTGSYDRATVQDVMLRSVERRFGDALPASPVEWLTDNGSAYRAHETRAFARELWLEPRTTAVRSPQSNGIAESFVKTM
KRDYIEMMPKPDSRTAVGNFAIAFEYYNEHHPHSALGYHSPREYLRSRVSQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67379.1 transposase-like protein Not tested PAI II CFT073 Protein 2e-84 72
unnamed CAC39284.1 hypothetical protein Not tested LPA Protein 4e-85 72
SF2985 NP_708759.1 insertion element IS2 transposase InsD Not tested SHI-1 Protein 6e-83 72
tnpF AAD44739.1 TnpF Not tested SHI-2 Protein 3e-84 71
SF3708 NP_709447.1 IS2 transposase TnpB Not tested SHI-2 Protein 7e-91 69
aec49 AAW51732.1 Aec49 Not tested AGI-3 Protein 1e-89 69
SF3721 NP_709460.1 IS2 transposase TnpB Not tested SHI-2 Protein 7e-91 69
S4061 NP_839230.2 insertion element IS2 transposase InsD Not tested SHI-2 Protein 4e-91 69
insD YP_002414033.1 insertion element IS2 transposase InsD Not tested Not named Protein 4e-91 69
S4050 NP_839218.2 insertion element IS2 transposase InsD Not tested SHI-2 Protein 7e-91 69
S3189 NP_838472.2 insertion element IS2 transposase InsD Not tested SHI-1 Protein 5e-90 68
ECO111_3773 YP_003236109.1 putative IS2 transposase InsAB Not tested LEE Protein 5e-85 67
unnamed CAC39283.1 hypothetical protein Not tested LPA Protein 4e-86 64
c5197 NP_757045.1 transposase insD Not tested PAI II CFT073 Protein 2e-61 62
insD YP_854263.1 IS2 transposase Not tested PAI I APEC-O1 Protein 3e-67 62
insD AAZ04432.1 IS2 transposase Not tested PAI I APEC-O1 Protein 2e-67 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B565_2205 YP_004392857.1 insertion element IS2 transposase InsD VFG0649 Protein 2e-83 72
B565_2205 YP_004392857.1 insertion element IS2 transposase InsD VFG1732 Protein 2e-91 69
B565_2205 YP_004392857.1 insertion element IS2 transposase InsD VFG0621 Protein 3e-91 69
B565_2205 YP_004392857.1 insertion element IS2 transposase InsD VFG0608 Protein 3e-91 69