Gene Information

Name : B565_1109 (B565_1109)
Accession : YP_004391761.1
Strain : Aeromonas veronii B565
Genome accession: NC_015424
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 1224237 - 1225010 bp
Length : 774 bp
Strand : +
Note : -

DNA sequence :
ATGAAAAAAGCTAACGGCTTATGGCTGAAAACGGGGCTGCTGGTCAGCCTGCTGATACCACTGTTTTGCTCCTGGCCTGC
GCTGGCACAGGACGCCATGTCGGCGGTGACCGTCAAGACCATGGGGGATGGCTCTCAGGAGTACAGCCTGACCCTGCAAG
TGCTGGCGCTGATGACCGCGCTCTCCTTCTTGCCGGCCATGGTGATCATGATGACCTCGTTTACCCGCATCATTGTGGTG
TTGGGTATCTTGCGCCAGGCGATCGGTCTGCAACAGAGTCCTTCCAACCAGGTGTTGATCGGCATCGCCCTGTTCATGTC
GTTCTTCATCATGTCGCCGGTGCTGGATCGCATCAATGATGAGGCGTTGCAGCCCTATCTGGCCGAGACCATTCAGGCAA
AGGAGGCGCTGGAGCGGGCCGAGTTGCCCATCCATCAGTTCATGCTGGCCCAGACCCGCATCAAGGATCTCAACACCTTT
ATGGAGATCGCCAACGTGCAGGTGGAGAAACCTGCCGATGTGCCGCTACGAGTGCTGATCCCGGCGTTTGTCACCAGCGA
GCTGAAAACCGCCTTCCAGATTGGTTTTATGCTGTTCTTGCCGTTCCTGGTCATCGATCTGGTGGTCGCCAGTATTCTGA
TGGCGATGGGGATGATGATGCTCTCGCCGATGATCGTCTCGCTGCCCTTCAAGTTGATGCTGTTCGTGATGGTGGATGGC
TGGAATCTCATTCTGGGGTCGCTGGCCAACAGTTTCGGACTGGGTGCCGGTTAG

Protein sequence :
MKKANGLWLKTGLLVSLLIPLFCSWPALAQDAMSAVTVKTMGDGSQEYSLTLQVLALMTALSFLPAMVIMMTSFTRIIVV
LGILRQAIGLQQSPSNQVLIGIALFMSFFIMSPVLDRINDEALQPYLAETIQAKEALERAELPIHQFMLAQTRIKDLNTF
MEIANVQVEKPADVPLRVLIPAFVTSELKTAFQIGFMLFLPFLVIDLVVASILMAMGMMMLSPMIVSLPFKLMLFVMVDG
WNLILGSLANSFGLGAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 1e-27 44
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 5e-27 44
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 5e-27 44
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 2e-27 44
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 2e-27 44
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 1e-27 44
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 1e-26 43
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 4e-26 43
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 7e-27 43
yscR NP_456109.1 putative type III secretion protein Virulence SPI-2 Protein 3e-24 41
yscR NP_805090.1 type III secretion system protein Virulence SPI-2 Protein 3e-24 41
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 2e-24 41
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 2e-24 41
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 1e-24 41
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 5e-21 41
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 5e-21 41
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 5e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B565_1109 YP_004391761.1 flagellar biosynthetic protein FliP VFG1259 Protein 8e-65 65
B565_1109 YP_004391761.1 flagellar biosynthetic protein FliP VFG2016 Protein 1e-59 63
B565_1109 YP_004391761.1 flagellar biosynthetic protein FliP VFG2494 Protein 2e-54 60
B565_1109 YP_004391761.1 flagellar biosynthetic protein FliP VFG2338 Protein 3e-53 55
B565_1109 YP_004391761.1 flagellar biosynthetic protein FliP VFG0044 Protein 4e-25 42
B565_1109 YP_004391761.1 flagellar biosynthetic protein FliP VFG0519 Protein 8e-25 41