Gene Information

Name : Alide2_4135 (Alide2_4135)
Accession : YP_004389968.1
Strain : Alicycliphilus denitrificans K601
Genome accession: NC_015422
Putative virulence/resistance : Resistance
Product : SSS sodium solute transporter superfamily protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 4313761 - 4315497 bp
Length : 1737 bp
Strand : +
Note : KEGG: rpf:Rpic12D_0449 SSS sodium solute transporter superfamily; TIGRFAM: Sodium/solute symporter, subgroup; PFAM: Sodium/solute symporter

DNA sequence :
ATGAAGCGCATACAGACCGCAGCCAGCAGCACGCTGGCCCTGGCCAGCCTGTGGGCCGCCAACGCAGCCCACGCCGCCGG
TGGCGACCTGGGCCAGGCCGCCAAGCAGGAAACCAACTGGACGGCCATCGTCATGTTCGCCATCTTCGTGGCCGGCACGC
TGTGGATCACGAAGTGGGCCGCATCCAAGACCCGCTCGGCGGCGGACTTCTACACCGCTGGCGGCGGCATCACGGGCTTC
CAGAACGGCCTGGCGATCGCCGGCGACTACATGTCCGCAGCCTCGTTCCTGGGCATCTCGGCGGCCGTGATGGCTTCGGG
CTACGACGGGCTGATCTACTCCATCGGCTTCCTCGTGGGCTGGCCCGTCATCACCTTCCTGATGGCCGACCGCCTGCGCA
ACCTGGGCAAGTTCACCTTCGCCGACGTGGCCGGCTACCGCTTCGCGCAGGCGCCCATCCGCATGTTCGCAGCCTCGGGC
ACGCTGATCGTGGTGGCCTTCTACCTGATCGCGCAGATGGTCGGCGCCGGCCAGCTCATCAAGCTGCTGTTCGGCCTGGA
GTACTGGATGGCGGTGGTCATCGTCGGCGCGCTGATGATGGTCTACGTGCTGTTCGGCGGCATGACGGCCACCACCTGGG
TGCAGATCATCAAGGCCTGCCTGCTGCTCGCCGGCGTGACCTTCATGGCCTTCATGGTGCTGGCCAACTACGGCTTCAGC
CCCGAGGCGCTGTTCGCCAAGGGCGTGGAGGTGCGCACGCAGATCGCCGCCAACGCGGGCAAGACGCCCGAAGAGGCGGC
CAGGGCGGGCCTGTCCATCATGGGCCCGGGCGGCTTCATCAAGGATCCCATCTCGGCCATCTCGTTCGGTATGGCGCTGA
TGTTCGGCACGGCCGGTCTGCCCCACATCCTGATGCGCTTCTTCACCGTGCCCAACGCCAAGGAGGCGCGCAAGTCCGTG
GGCTGGGCCACGGTGTGGATCGGCTACTTCTACATCCTGATCTTCATCATCGGCTTCGGCGCCATCACCATGGTGCTCAC
GAACCCCGAGATGTCCGACACCGTCAAGGGCGTGATCAAGGGCGGCGCGGGCACGGCCAACATGGCGGCCGTGCTGGTGG
CCAAGAGCGTGGGCGGCAACATCTTCTACGGCTTCATCTCCGCCGTGGCGTTCGCCACCATCCTGGCCGTGGTCGCGGGC
CTGACGCTGTCGGGCGCCTCGGCCGTGTCGCACGACCTGTACGCCACCGTCATCAAGAACGGCAAGGCCGACAGCGCCGC
CGAGCTCAAGGTCTCGCGCATCACCACCCTGGCGCTGGGCGTGATCGCCGTGCTGCTGGGCATCGCGTTCGAGAAGCAGA
ACATCGCCTTCATGGTGTCGCTGGCCTTCGCGGTCGCGGCCTCGGCCAACTTCCCGGCGCTGATCCTGTCCATCCTGTGG
AAGGGCTGCACCACGCGCGGCGCGGTGATCGGCGGCTTCCTGGGCCTGATCTCCTCGGTGGGCCTGACCATCGTGTCGCC
CTCGGTGTGGGAAGCCACGCTGGGCAACCCGGCCGGGTCGGCGCTGTTCCCCTACTCCTCGCCGGCCCTGTTCTCCATGG
TGATCGGCTTCGTGGGCGTGTGGCTGTTCTCGATCACCGACGGCAGCGCGCGCGCGGCCAAGGAGCGTGAGGCCTTCGCC
GCGCAGCAGGTGCGCTCCGAGACCGGCCTGGGCGCGTCCGGCGCATCGGGCCACTGA

Protein sequence :
MKRIQTAASSTLALASLWAANAAHAAGGDLGQAAKQETNWTAIVMFAIFVAGTLWITKWAASKTRSAADFYTAGGGITGF
QNGLAIAGDYMSAASFLGISAAVMASGYDGLIYSIGFLVGWPVITFLMADRLRNLGKFTFADVAGYRFAQAPIRMFAASG
TLIVVAFYLIAQMVGAGQLIKLLFGLEYWMAVVIVGALMMVYVLFGGMTATTWVQIIKACLLLAGVTFMAFMVLANYGFS
PEALFAKGVEVRTQIAANAGKTPEEAARAGLSIMGPGGFIKDPISAISFGMALMFGTAGLPHILMRFFTVPNAKEARKSV
GWATVWIGYFYILIFIIGFGAITMVLTNPEMSDTVKGVIKGGAGTANMAAVLVAKSVGGNIFYGFISAVAFATILAVVAG
LTLSGASAVSHDLYATVIKNGKADSAAELKVSRITTLALGVIAVLLGIAFEKQNIAFMVSLAFAVAASANFPALILSILW
KGCTTRGAVIGGFLGLISSVGLTIVSPSVWEATLGNPAGSALFPYSSPALFSMVIGFVGVWLFSITDGSARAAKEREAFA
AQQVRSETGLGASGASGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 3e-103 54
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 1e-65 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Alide2_4135 YP_004389968.1 SSS sodium solute transporter superfamily protein BAC0564 Protein 1e-132 64
Alide2_4135 YP_004389968.1 SSS sodium solute transporter superfamily protein BAC0570 Protein 3e-119 60