Gene Information

Name : Alide2_0404 (Alide2_0404)
Accession : YP_004386344.1
Strain : Alicycliphilus denitrificans K601
Genome accession: NC_015422
Putative virulence/resistance : Unknown
Product : NusG antitermination factor
Function : -
COG functional category : K : Transcription
COG ID : COG0250
EC number : -
Position : 422664 - 423254 bp
Length : 591 bp
Strand : +
Note : TIGRFAM: Transcription antitermination protein, NusG; PFAM: Transcription antitermination protein, NusG, N-terminal; KOW; KEGG: dia:Dtpsy_3251 NusG antitermination factor; SMART: Transcription antitermination protein, NusG, N-terminal; KOW

DNA sequence : 
ATGGTGGATGCCGTGGAAACCAATGGCGCTCAGCCTCCTGTTGATGCATCGGTGAATCCCGACTTGCGTTGGTACATCGT
GCACGCCTACTCCGGGATGGAGAAGGCGGTGGAGCGCAATATTCAGGAGCGCATCGTACGCTCCGGCATGCAGCACAAGT
TTGGCCGCATCCTGGTCCCGACCGAGGAGGTCGTGGAGATGAAGAATGGCCAGCGCAAGACCACCGAGAGGCGCTTGTTC
CCCGGCTATGTGTTCGTCGAAATGGTCATGGATGACGACACTTGGCATCTGGTGAAGCACACCAGCAAGGTCACTGGCTT
CGTGGGTGGGGTGAAGAATCGCCCTGCGCCCATTTCCGAGGAGGAAGTGCAGAAGATCGTGAGCCAGATGCAGCAAGGCA
CCGACAAGCCGCGCCACAAGATCGAGTTCATGGTCGGTGAACTGGTGCGCGTCAAGGAGGGGCCCTTCACGGACTTCAAT
GGTTCGGTGGAAGAGGTCAACTACGAGAAGAACCGCCTGCGGGTCTCGGTGATGATTTTCGGTCGTTCCACTCCCGTGGA
ACTGGAGTTCGGTCAGGTGGAGAAAACGTGA

Protein sequence : 
MVDAVETNGAQPPVDASVNPDLRWYIVHAYSGMEKAVERNIQERIVRSGMQHKFGRILVPTEEVVEMKNGQRKTTERRLF
PGYVFVEMVMDDDTWHLVKHTSKVTGFVGGVKNRPAPISEEEVQKIVSQMQQGTDKPRHKIEFMVGELVRVKEGPFTDFN
GSVEEVNYEKNRLRVSVMIFGRSTPVELEFGQVEKT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00341 YP_008207806.1 Transcription antiterminator Not tested AbaR25 Protein 2e-49 56
BJAB0868_00345 YP_008211671.1 Transcription antiterminator Not tested AbaR26 Protein 2e-49 56