Gene Information

Name : Alide2_4044 (Alide2_4044)
Accession : YP_004389879.1
Strain : Alicycliphilus denitrificans K601
Genome accession: NC_015422
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 4213609 - 4215456 bp
Length : 1848 bp
Strand : -
Note : KEGG: dia:Dtpsy_2971 thiamine biosynthesis protein ThiC; TIGRFAM: Thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC

DNA sequence :
ATGAACGCCCCCGATTCGTTTTCCCAGCTGCTGGCCCGCACGCGCGAGCCTTTTCCCGCCTCGGCCAAGTCCTTCATCAC
CGGCAGCCGCCCTGACCTGCGCGTGCCGGTGCGCGACATTCGCCTGACCAACGGCGAGGTGGTGAGCGTCTACGACACCT
CGGGCCCCTACACCGATCCCGCCGCCACGATCGACGTGCGGCGCGGCCTGCAGAGCGTGCGCGGCGCCTGGATCGAGGAG
CGCGGCGACAGCGAGGTTTACGAAGGCCGCAAGCCGGTGGCGCTCGACGATGGGCAAAGGAGCGAGGACGCCGCCCGACT
GGCGGCCCTGCGCCTGGAGGCCGCCGCCCTGCAGCGCCAGCCGCGCCGCGCCAAGGCCGGGGCCAACGTCACGCAGATGC
ACTACGCGCGCCGCGGCATCGTCACGCCCGAGATGGAGTACGTGGCGCTGCGCGAGAATGGCAGGCGCGAGTGGATGGCG
CAATACCTGCAGGACGCCGCCCGCGAGAAGCGCCTGGCCGGCAACCCGCTGGGCGCCAGCATCCCCCAGGTCATCACCCC
CGAGTTCGTGCGCGACGAGGTGGCGCGCGGCCGCGCCATCATCCCGGCCAACATCAACCACCCCGAGGTGGAGCCCATGG
CCATCGGGCGCAACTTCCTCGTGAAGATCAACGCCAACATCGGCAACTCGGCCGTCACCTCCAGCATCGAGGAAGAGGTG
GAAAAGCTCGTCTGGGCCATCCGCTGGGGCGCCGACAACGTGATGGACCTGTCCACCGGCAAGAACATCCACACCACGCG
CGACTGGATCGTGCGCAACTCGCCCGTGCCCATCGGCACCGTGCCGATCTACCAGGCGCTGGAAAAAGTGGGCGGCATCG
CCGAGGACCTCACCTGGGAAATCTTCCGCGACACCCTGGTCGAGCAGGCCGAGCAGGGCGTGGACTACTTCACCATCCAC
GCGGGCGTGCGCCTGGCCTACATCCACCTCACGGCGGCGCGGCGCACCGGCATCGTCTCGCGCGGCGGCTCCATCATGGC
CAAGTGGTGTATGGCGCACCACAAGGAGAGCTTCCTCTACGAGCACTTCGAGGACATCTGCGACATCATGAAGCAGTACG
ACGTGGCCTTCAGCCTGGGCGACGGCCTGCGCCCCGGCTGCGCGTCCGATGCCAACGACGAGGCCCAGTTCGCCGAGCTG
CACACGCTGGGCGAACTGACCCAGGTGGCCTGGAAGCACGACGTGCAGACCATGATCGAAGGCCCCGGCCACGTGCCCAT
GCACATGATCCAGGCCAACATGACCGAGCAGCTCAAGACCTGCCACGAGGCGCCGTTCTACACCCTCGGCCCCCTGACCA
TCGACATCGCGCCCGGCTACGACCACATCGCCTCGGCCATCGGCGCCGCCATGATCGGCTGGATGGGCACGGCCATGCTG
TGCTACGTGACGCCCAAGGAGCACCTGGGCCTGCCCGACCGCGACGATGTGAAGCAAGGCATCATCGCCTACAAGATCGC
CGCGCACGCCGCCGACGTCGCCAAGGGCCACCCGGGCGCGCGCGCGCGCGACGACGCGCTCAGCCAGGCGCGCTTCGACT
TCCGCTGGCAGGACCAGTTCAACCTGGGCCTGGACCCCGAGACCGCGCAGGAGTACCACGACGAGACCCTGCCCAAGGAC
GCGGCCAAGGTGGCGCATTTCTGCTCCATGTGCGGGCCGAAGTTCTGCTCCATGAAGATCACGCAGGAGGTGCGCGAATT
CGCCCAGCAGGGCCTGCAGGAAAAAGCCGCGGAGTTCAACCGCGCGGGTGGCGAGCTCTACGTGCCCATCCATCCGGTCC
GGGGCTGA

Protein sequence :
MNAPDSFSQLLARTREPFPASAKSFITGSRPDLRVPVRDIRLTNGEVVSVYDTSGPYTDPAATIDVRRGLQSVRGAWIEE
RGDSEVYEGRKPVALDDGQRSEDAARLAALRLEAAALQRQPRRAKAGANVTQMHYARRGIVTPEMEYVALRENGRREWMA
QYLQDAAREKRLAGNPLGASIPQVITPEFVRDEVARGRAIIPANINHPEVEPMAIGRNFLVKINANIGNSAVTSSIEEEV
EKLVWAIRWGADNVMDLSTGKNIHTTRDWIVRNSPVPIGTVPIYQALEKVGGIAEDLTWEIFRDTLVEQAEQGVDYFTIH
AGVRLAYIHLTAARRTGIVSRGGSIMAKWCMAHHKESFLYEHFEDICDIMKQYDVAFSLGDGLRPGCASDANDEAQFAEL
HTLGELTQVAWKHDVQTMIEGPGHVPMHMIQANMTEQLKTCHEAPFYTLGPLTIDIAPGYDHIASAIGAAMIGWMGTAML
CYVTPKEHLGLPDRDDVKQGIIAYKIAAHAADVAKGHPGARARDDALSQARFDFRWQDQFNLGLDPETAQEYHDETLPKD
AAKVAHFCSMCGPKFCSMKITQEVREFAQQGLQEKAAEFNRAGGELYVPIHPVRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 67
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 67
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 65