Gene Information

Name : Alide2_4042 (Alide2_4042)
Accession : YP_004389877.1
Strain : Alicycliphilus denitrificans K601
Genome accession: NC_015422
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerC
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 4211580 - 4212479 bp
Length : 900 bp
Strand : +
Note : TIGRFAM: Tyrosine recombinase XerD; HAMAP: Tyrosine recombinase xerC; Tyrosine recombinase XerD; KEGG: dia:Dtpsy_0903 tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage

DNA sequence :
ATGCTGCCCGAAAGCCAGAACGCCATCGACTCGTTCCTAGACGCCCTGTGGCTGGAGGATGGCCTGTCGCGCAACACCCT
GGCCGCCTACCGCCGCGACCTCTCGCTGTATGCCGGCTGGCTGGCGGCGCAGCAGCCGCCTCTGGCGCTGGACGCCACGG
CAGAGCACCATCTGAGCGGTTACTTCGCCGCGCGCCATGCCCAGACGCGTGCCACCTCCGCCAACCGGCGCCTGACGGTG
CTGCGCCGCTACTTCCACTGGGCGCTGCGCGAGCGGCGCATCGCGCAGGATCCCACGGTGCGCCTGCTGGCCGCGCGCCA
GCCGCTGCGCGTGCCCAAGACGCTGACGCAGGCGCAGGTGGAGGCGCTGCTGCACGCCCCGGACACGGCTACCGCCCTGG
GCCTGCGCGACCGCACCATGCTCGAACTGATGTACGCCAGCGGCCTGCGCGTGAGCGAGCTGGTCACGCTCAAGACCTTC
CAACTGGGGCTGGCCGAGGGCGTGCTGCGCATCACCGGCAAGGGCGGCAAGGAGCGGCTCGTGCCCTTCGGCGAGGAGGC
GCGGCGCTGGCTGGAGCGTTACCTGGCCGAGGGGCGCGGCGCCATCCTGGCGGGCCGGCAGACCGACGACCTGTTCGTCA
CCCAGCGCGGCAGCGCCATGTCGCGCGTCATGTTCTGGGTCATCGTCAAGAAATGCGCGCAGCTCGCGGGCATCACCGCG
CCGCTGTCGCCGCACACGCTGCGCCATGCGTTCGCCACGCACCTGCTCAACCATGGGGCGGACCTGCGCGTGGTGCAGTT
GCTGCTGGGGCATGCCGACATCTCCACCACCACCATCTATACCCACGTGGCGCGCGAGCGCCTGAAGCAGCTGCATGCGC
AGCACCACCCGCGCGGGTGA

Protein sequence :
MLPESQNAIDSFLDALWLEDGLSRNTLAAYRRDLSLYAGWLAAQQPPLALDATAEHHLSGYFAARHAQTRATSANRRLTV
LRRYFHWALRERRIAQDPTVRLLAARQPLRVPKTLTQAQVEALLHAPDTATALGLRDRTMLELMYASGLRVSELVTLKTF
QLGLAEGVLRITGKGGKERLVPFGEEARRWLERYLAEGRGAILAGRQTDDLFVTQRGSAMSRVMFWVIVKKCAQLAGITA
PLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTTIYTHVARERLKQLHAQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 9e-56 57
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 9e-56 57