Gene Information

Name : Alide2_3954 (Alide2_3954)
Accession : YP_004389790.1
Strain : Alicycliphilus denitrificans K601
Genome accession: NC_015422
Putative virulence/resistance : Unknown
Product : cytochrome c oxidase subunit I
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0843
EC number : -
Position : 4119670 - 4121301 bp
Length : 1632 bp
Strand : +
Note : KEGG: ajs:Ajs_3536 cytochrome-c oxidase; TIGRFAM: Cytochrome c oxidase, subunit I bacterial type; PFAM: Cytochrome c oxidase, subunit I

DNA sequence :
ATGAGCGCAGTTCTGGACAACCATGGGCACGCGGCAGGCCATGCCGCCGGTCACGCGGACCACCACCAGCCCACCGGCTG
GCGGCGCTGGCTGTTCGCCACCAACCACAAGGACATCGGCACGCTGTACCTGCTGTTCTCCTTCACCATGCTGATGGTCG
GCGGCCTGCTGGCGATGCTGATCCGCGCCGAGCTGTTCCAGCCCGGCCTGCAGATCGTGAACCCCGAGATGTTCAACCAG
TTCACCACCATGCACGGGCTGATCATGGTGTTCGGCGCCATCATGCCGGCCTTCGTGGGCTTTGCGAACTGGATGATCCC
GCTGCAGATCGGCGCCTCCGACATGGCGTTCGCGCGCATGAACAACTTCAGCTTTTGGCTGCTGGTGCCCGCGGGCATCA
TGCTGTCGGCCTCGTTCTTCATGCCGGGCGGGGCGCCCGCAGGCGGCTGGACGCTCTACGCGCCGCTGTCGGCGCAGATG
CCCATGTCGCTGGACGCGGCCATCTTCGCGCTGCACATCATGGGCGCCTCGTCCATCATGGGCGCGATCAACATCATCGT
CACCATCCTGAACATGCGCGCGCCCGGCATGACGCTGATGAAGATGCCGATCTTCTGCTGGAGCTGGCTGATCACCGCCT
ACCTCCTGATCGCCGTGATGCCGGTGTTCGCCGGCGCCATCACGATGACGCTCACCGACCGCCATTTCGGCACCAGCTTC
TTCAACCCCGCCGGCGGCGGCGACCCGGTGATGTACCAGCACATCTTCTGGTTCTTCGGCCACCCCGAGGTCTACATCAT
GATCCTGCCGGCCTTCGGCATGATCAGCCAGATCGTGCCGACCTTCGCGCGCAAGCGGCTGTTCGGCTACACGTCCATGG
TGTATGCGATCGCGGCGATCGCCACGCTGTCGATGATCGTCTGGGCGCACCACATGTTCACCACCGGCATGCCGGTCACG
GGCCAGCTGTTCTTCATGTACGGCACCATGCTGATCGCCATTCCGACCGGGGTGAAGGTGTTCAACTGGACCGCCACCAT
GTGGCGCGGCTCCATGACCTTCGAGACCCCGATGCTGTGGGCCGTGGGCTTCATCTTCGTGTTCACCATCGGCGGCTTCA
CCGGCGTGATACCGGCCGTGGTGCCCATCGACACCCAGATCCAAGACACCTACTACATCATCGCCCACTTCCACTACGTG
CTGGTGGCCGGCTCCCTGTTCGCCATCTACGGCGCTTACTACTACTGGGCGCCCAAATGGAGCGGCGTGATGTACAGCGA
GACGCGCGGCAGGATCCATTTCTGGTGGTCCATGATCTCCTTCAACGTCGCGTTCTTCCCCATGCACTTCCTGGGGCTCG
CCGGTATGCCGCGCCGCTATGCCGACTACCCGATGCAGTTCGCCGACTTCAACATGATCGCCTCGATCGGCGCCTTCTTC
TTCGGCGCGGCGCAGCTGTACTTCTTCTTCGCCGTGGTGCTGCCCATGCTGCGCGGCAAGGGCGAGAAGGCCCCGCAGCG
CCCCTGGGAGGCGGCCGAGGGGCTGGAGTGGGAGGTTCCGTCGCCGGCACCGTTCCATACCTTCGAAAACCCGCCGAAGC
TGGACGCGACGGCAACCCGGGTCGTCGGGTGA

Protein sequence :
MSAVLDNHGHAAGHAAGHADHHQPTGWRRWLFATNHKDIGTLYLLFSFTMLMVGGLLAMLIRAELFQPGLQIVNPEMFNQ
FTTMHGLIMVFGAIMPAFVGFANWMIPLQIGASDMAFARMNNFSFWLLVPAGIMLSASFFMPGGAPAGGWTLYAPLSAQM
PMSLDAAIFALHIMGASSIMGAINIIVTILNMRAPGMTLMKMPIFCWSWLITAYLLIAVMPVFAGAITMTLTDRHFGTSF
FNPAGGGDPVMYQHIFWFFGHPEVYIMILPAFGMISQIVPTFARKRLFGYTSMVYAIAAIATLSMIVWAHHMFTTGMPVT
GQLFFMYGTMLIAIPTGVKVFNWTATMWRGSMTFETPMLWAVGFIFVFTIGGFTGVIPAVVPIDTQIQDTYYIIAHFHYV
LVAGSLFAIYGAYYYWAPKWSGVMYSETRGRIHFWWSMISFNVAFFPMHFLGLAGMPRRYADYPMQFADFNMIASIGAFF
FGAAQLYFFFAVVLPMLRGKGEKAPQRPWEAAEGLEWEVPSPAPFHTFENPPKLDATATRVVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1478 YP_001800872.1 cytochrome c oxidase subunit I Not tested Not named Protein 3e-91 45