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Name : Alide2_3391 (Alide2_3391) Accession : YP_004389240.1 Strain : Alicycliphilus denitrificans K601 Genome accession: NC_015422 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 3528764 - 3529588 bp Length : 825 bp Strand : + Note : PFAM: Integrase, catalytic core; KEGG: dia:Dtpsy_3179 integrase catalytic region DNA sequence : ATGTGCAAGATCATGACGGTGCACCCCAGCGGCTACTACGCCTGGAAGGCCGATCCGGTGAGCCCACGCGCCCAGGACGA TCAACGGGTGCTGGGCCTGCTCAAGCACGCGTGGTTGGAGAGCGGCGGCGTGTACGGCTACCGCAAGCTCACCCTGGACA TGCGCGATCTAGGCGAGTCCTGCGGCAAGCACCGCGTGGCCCGATTGCTCAAACTCGAAGGACTGCGCTCGCAGACCGGC TACCGCCGTCGCCCTGGCATGCGTGGTGGCAAGCCCGCGGTCGTCGCGCCCAACCACCTGCAGCGCCAGTTCTCCGTGGC GCAGCCCAATCAATCCTGGGTGACCGACATCACCTACATCCGCACCCATGAGGGCTGGCTGTACCTGGCCGTGGTGGTCG ATCTGTTCTCGCGTCAGGTGGTCGGCTGGTCAATGGGTAGCCGCATCGATACCGGGCTGGCGCTCGATGCGCTGGTGATG GCCTTGTGGCGTCGTCGACCCGAGCAGCCAGTCACAGTGCATTCGGATCAAGGCAGTCAATTCACTGGGCATGACTGGCA GGACTTCCTACGCGACCACAAGCTGATCTGCAGCATGAGCCGTCGCGGCAACTGCCACGACAACGCCGTGGCCGAGAGCT TCTTCCAGTTGCTCAAGCGCGAACGCATCCGCCGCCAGATCTATCCGACCCGCGATGACGCGAGAGCCGATGTCTTCAAC TACATCGAGATGTTCTACAACCCTAAGCGCCGCCATGGCACTGCCGGAGATACTTCGCCGGTAGAGTTCGAGAGACGCCA TTCCCAACGGCTCAAAAGTGTCTAG Protein sequence : MCKIMTVHPSGYYAWKADPVSPRAQDDQRVLGLLKHAWLESGGVYGYRKLTLDMRDLGESCGKHRVARLLKLEGLRSQTG YRRRPGMRGGKPAVVAPNHLQRQFSVAQPNQSWVTDITYIRTHEGWLYLAVVVDLFSRQVVGWSMGSRIDTGLALDALVM ALWRRRPEQPVTVHSDQGSQFTGHDWQDFLRDHKLICSMSRRGNCHDNAVAESFFQLLKRERIRRQIYPTRDDARADVFN YIEMFYNPKRRHGTAGDTSPVEFERRHSQRLKSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| trp1329B | CAB46576.1 | IS1329 transposase B | Not tested | HPI | Protein | 2e-43 | 47 |
| tnpA | AAD44733.1 | TnpA | Not tested | SHI-2 | Protein | 5e-37 | 47 |
| tnpB | CAB61574.1 | transposase B | Not tested | HPI | Protein | 3e-43 | 46 |
| unnamed | AAL57519.1 | transposase 1 | Not tested | LEE | Protein | 4e-43 | 44 |
| unnamed | AAL57581.1 | transposase 1 | Not tested | LEE | Protein | 2e-43 | 44 |
| insF | CAC43414.1 | transposase of insertion element IS3 | Not tested | PAI III 536 | Protein | 4e-44 | 43 |
| ECO111_3732 | YP_003236068.1 | putative IS3 transposase InsF | Not tested | LEE | Protein | 8e-43 | 43 |
| unnamed | AAC31485.1 | L0006 | Not tested | LEE | Protein | 1e-30 | 42 |
| ECs4537 | NP_312564.1 | hypothetical protein | Not tested | LEE | Protein | 2e-30 | 42 |
| tnpA1133 | ACK44540.1 | TnpA | Not tested | SGI1 | Protein | 3e-43 | 42 |
| orfB | AGK07032.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 3e-43 | 42 |
| orfB | AGK07090.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 3e-43 | 42 |
| Z5089 | NP_290241.1 | transposase | Not tested | LEE | Protein | 1e-30 | 42 |
| unnamed | ACU09432.1 | IS911 transposase orfB | Not tested | LEE | Protein | 1e-30 | 42 |
| unnamed | CAI43898.1 | putative transposase | Not tested | LEE | Protein | 2e-31 | 42 |
| aec65 | AAW51748.1 | Aec65 | Not tested | AGI-3 | Protein | 2e-31 | 42 |
| ECO111_3779 | YP_003236114.1 | putative IS602 transposase OrfB | Not tested | LEE | Protein | 4e-33 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Alide2_3391 | YP_004389240.1 | integrase catalytic subunit | VFG1631 | Protein | 3e-44 | 43 |
| Alide2_3391 | YP_004389240.1 | integrase catalytic subunit | VFG0785 | Protein | 6e-31 | 42 |
