Gene Information

Name : Alide2_3339 (Alide2_3339)
Accession : YP_004389195.1
Strain : Alicycliphilus denitrificans K601
Genome accession: NC_015422
Putative virulence/resistance : Virulence
Product : lytic transglycosylase catalytic subunit
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 3480812 - 3481339 bp
Length : 528 bp
Strand : +
Note : PFAM: Lytic transglycosylase-like, catalytic; KEGG: ajs:Ajs_1544 lytic transglycosylase, catalytic

DNA sequence : 
ATGCGCTTGGTTGCCGTTTTCATGGTGGCAATGCTGCCGGCCGCTTCAGCCCTGGCCACGTGCTGGGACACCGCGGCGCA
ACGCTACGGCATTGCGCCGGAGTTGCTCTACGCCGTCGCCCGTACCGAGTCGAGCCTGAATCCGCGTGCGGTGAACCGCG
CGCATGAGAGGCGCACGGGCAGCTACGACATCGGCCTGATGCAGATCAACAGCCGGCACCTGCCCCGGCTGGCTGGCTTC
GGCATACGCGAAGCCGATCTGTACGACCCCTGCGTGAACCTGCAGGTGGGGGCGTGGCTGATGGCCGACAGCTTCGCCCG
GCACGGCATCAGCTGGAATGCCGTGGGTGCCTACAACGCAGCATGCACCCAGCTCAAGGGGGATGCCTGCACTCAAGCCA
GGGCCGCCTATGCCTGGAAGGTGTACCGGCATCTGCCGTCAACGCGTGGTGTGGGTCAGGGTACACGGCAGAAGGCCACC
GCCGTCGTGGCGCAAAGCCAGGGCCTGCGCGTGAGGGTTTCGCCATGA

Protein sequence : 
MRLVAVFMVAMLPAASALATCWDTAAQRYGIAPELLYAVARTESSLNPRAVNRAHERRTGSYDIGLMQINSRHLPRLAGF
GIREADLYDPCVNLQVGAWLMADSFARHGISWNAVGAYNAACTQLKGDACTQARAAYAWKVYRHLPSTRGVGQGTRQKAT
AVVAQSQGLRVRVSP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ltgX AAW83060.1 LtgX Not tested GGI Protein 4e-23 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Alide2_3339 YP_004389195.1 lytic transglycosylase catalytic subunit VFG0994 Protein 6e-13 41